RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 MAP1SQ66K74 1059 aaPredicted RBP17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 BBS5Q8N3I7 341 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 SMYD1Q8NB12 490 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 CMTM5Q96DZ9 223 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 LRGUKQ96M69 825 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 NRDE2Q9H7Z3 1164 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 GNEQ9Y223 722 aaKnown RBP17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 A0A1B0GTW7 788 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 HMX2A2RU54 273 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 APOC4-APOC2K7ER74 178 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 ATG7O95352 703 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 TRUB2O95900 331 aaKnown RBP17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 APOC2P02655 101 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 IQCF3P0C7M6 154 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 TCF7P36402 384 aaPredicted RBP17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 RARS2Q5T160 578 aaKnown RBP17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 CAND1Q86VP6 1230 aaKnown RBP17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 MAN1C1Q9NR34 630 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 ZNF180Q9UJW8 692 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 SYNJ2BP-COX16A0A087WUM0 186 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 SPATA31C2B4DYI2 1134 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 BIRC5O15392 142 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 FBXO21O94952 628 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 LDHAP00338 332 aaKnown RBP17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 NCF2P19878 526 aaPredicted RBP17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 HSDL1Q3SXM5 330 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 FASTKD1Q53R41 847 aaKnown RBP17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 PPM1JQ5JR12 505 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 PDPK2PQ6A1A2 396 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 MAVSQ7Z434 540 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 SCUBE3Q8IX30 993 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 NIM1KQ8IY84 436 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 COPS5Q92905 334 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 PNPLA8Q9NP80 782 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 COX16Q9P0S2 106 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 SIX4Q9UIU6 781 aa17.4■□□□□ 0.38
PPP4R3A-202ENST00000554390 TRIP11Q15643 1979 aa17.39■□□□□ 0.38
PPP4R3A-202ENST00000554390 DPEP1P16444 411 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 STAT5BP51692 787 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 BACE1P56817 501 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 LAMTOR4Q0VGL1 99 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 USP41Q3LFD5 358 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 ARCQ7LC44 396 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 FAM83AQ86UY5 434 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 CPB2Q96IY4 423 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 INIPQ9NRY2 104 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 TBCCD1Q9NVR7 557 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 RSL24D1Q9UHA3 163 aaKnown RBP17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 BARX2Q9UMQ3 279 aaPredicted RBP17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 WDR37Q9Y2I8 494 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 MRPL42Q9Y6G3 142 aaKnown RBP17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 CCDC78A2IDD5 438 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 CRHR1P34998 444 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 STT3AP46977 705 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 IDH3AP50213 366 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 PHEXP78562 749 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 CDKL1Q00532 357 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 GBE1Q04446 702 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 KCNJ11Q14654 390 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 PDK1Q15118 436 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 GJC2Q5T442 439 aaPredicted RBP17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 TEDDM1Q5T9Z0 273 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 ADGRF2Q8IZF7 708 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 PHTF2Q8N3S3 785 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 GALNT4Q8N4A0 578 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 SLC4A11Q8NBS3 891 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 KCNK16Q96T55 309 aa17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 OXCT2Q9BYC2 517 aaPredicted RBP17.39■□□□□ 0.37
PPP4R3A-202ENST00000554390 ZBED1O96006 694 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 PGK2P07205 417 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 CYP3A5P20815 502 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 SLC1A6P48664 564 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 UNC5AQ6ZN44 842 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 Q6ZNX1 250 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 NCCRP1Q6ZVX7 275 aaPredicted RBP17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 WDR49Q8IV35 697 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 ERI1Q8IV48 349 aaKnown RBP17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 C1orf127Q8N9H9 656 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 CLEC4CQ8WTT0 213 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 SLC35B4Q969S0 331 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 PGBD4Q96DM1 585 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 ACO2Q99798 780 aaKnown RBP17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 TMPRSS4Q9NRS4 437 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 PNPOQ9NVS9 261 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 MKS1Q9NXB0 559 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 MAFBQ9Y5Q3 323 aaPredicted RBP17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 GHRHRQ02643 423 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 ZNF667Q5HYK9 610 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 FAM183BPQ6ZVS7 135 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 CYP4V2Q6ZWL3 525 aaPredicted RBP17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 TMIGD2Q96BF3 282 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 POPDC2Q9HBU9 364 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 HACL1Q9UJ83 578 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 GINS2Q9Y248 185 aa17.38■□□□□ 0.37
PPP4R3A-202ENST00000554390 ARID2Q68CP9 1835 aa17.37■□□□□ 0.37
PPP4R3A-202ENST00000554390 KRT38O76015 456 aa17.37■□□□□ 0.37
PPP4R3A-202ENST00000554390 SESN2P58004 480 aaPredicted RBP17.37■□□□□ 0.37
PPP4R3A-202ENST00000554390 YWHAEP62258 255 aaKnown RBP17.37■□□□□ 0.37
PPP4R3A-202ENST00000554390 MRPS22P82650 360 aaKnown RBP17.37■□□□□ 0.37
PPP4R3A-202ENST00000554390 PATL1Q86TB9 770 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms