RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 CCAR2Q8N163 923 aaKnown RBP9.22□□□□□ -0.93
TDP1-208ENST00000553989 C17orf53Q8N3J3 647 aaPredicted RBP9.22□□□□□ -0.93
TDP1-208ENST00000553989 CPXM2Q8N436 756 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 TTC39CQ8N584 583 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 AOPEPQ8N6M6 819 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 MLKLQ8NB16 471 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 OR2T3Q8NH03 318 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 DNASE2BQ8WZ79 361 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 P2RY11Q96G91 374 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 TMEM176AQ96HP8 235 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 ULBP1Q9BZM6 244 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 LHX5Q9H2C1 402 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 CCDC86Q9H6F5 360 aaKnown RBP9.22□□□□□ -0.93
TDP1-208ENST00000553989 IL21RQ9HBE5 538 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 TM7SF3Q9NS93 570 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 CISHQ9NSE2 258 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 OLA1Q9NTK5 396 aaKnown RBP9.22□□□□□ -0.93
TDP1-208ENST00000553989 HESX1Q9UBX0 185 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 PCOLCE2Q9UKZ9 415 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 CLEC4EQ9ULY5 219 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 PLA2G4CQ9UP65 541 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 FNDC3AQ9Y2H6 1198 aaKnown RBP9.22□□□□□ -0.93
TDP1-208ENST00000553989 NFE2L3Q9Y4A8 694 aa9.22□□□□□ -0.93
TDP1-208ENST00000553989 A0A1B0GVT2 93 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 FAM221BA6H8Z2 402 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 FLRT2O43155 660 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 TIMM44O43615 452 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 STX10O60499 249 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 RHOBTB3O94955 611 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 ZBED1O96006 694 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 DNTTP04053 509 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 TPM1P09493 284 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 CD19P15391 556 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 GTF2H1P32780 548 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 CSNK1EP49674 416 aaKnown RBP9.21□□□□□ -0.94
TDP1-208ENST00000553989 AFF3P51826 1226 aaKnown RBP9.21□□□□□ -0.94
TDP1-208ENST00000553989 COPAP53621 1224 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 BCAT1P54687 386 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 ADIGQ0VDE8 80 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 LRMPQ12912 555 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 ENPP2Q13822 863 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 SUZ12Q15022 739 aaKnown RBP9.21□□□□□ -0.94
TDP1-208ENST00000553989 NFIL3Q16649 462 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 TTC31Q49AM3 519 aaPredicted RBP9.21□□□□□ -0.94
TDP1-208ENST00000553989 NYAP1Q6ZVC0 841 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 CHST9Q7L1S5 443 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 FMNL3Q8IVF7 1028 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 SIX6OS1Q8N1H7 587 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 ZNF276Q8N554 614 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 ZNF366Q8N895 744 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 SLC4A11Q8NBS3 891 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 FBXL13Q8NEE6 735 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 RHBDD1Q8TEB9 315 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 GANCQ8TET4 914 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 WFIKKN2Q8TEU8 576 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 CYB5D2Q8WUJ1 264 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 EDEM1Q92611 657 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 EEF2KMTQ96G04 330 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 PIWIL1Q96J94 861 aaKnown RBP9.21□□□□□ -0.94
TDP1-208ENST00000553989 SLC2A11Q9BYW1 496 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 RAB20Q9NX57 234 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 SFMBT1Q9UHJ3 866 aa9.21□□□□□ -0.94
TDP1-208ENST00000553989 GOLGA6L9A6NEM1 432 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 TAF4O00268 1085 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 ZSCAN12O43309 604 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 MSI1O43347 362 aaKnown RBP9.2□□□□□ -0.94
TDP1-208ENST00000553989 FSBPO95073 299 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 SMC2O95347 1197 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 ZNF883P0CG24 379 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 HOXD9P28356 352 aaPredicted RBP9.2□□□□□ -0.94
TDP1-208ENST00000553989 RAD23BP54727 409 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 YWHAEP62258 255 aaKnown RBP9.2□□□□□ -0.94
TDP1-208ENST00000553989 FANCCQ00597 558 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 MYL5Q02045 173 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 ENPEPQ07075 957 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 BST2Q10589 180 aaKnown RBP9.2□□□□□ -0.94
TDP1-208ENST00000553989 SGO2Q562F6 1265 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 ARHGAP17Q68EM7 881 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 CCNI2Q6ZMN8 369 aaPredicted RBP9.2□□□□□ -0.94
TDP1-208ENST00000553989 KRBA2Q6ZNG9 492 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 SLCO6A1Q86UG4 719 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 AHI1Q8N157 1196 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 GUF1Q8N442 669 aaKnown RBP9.2□□□□□ -0.94
TDP1-208ENST00000553989 ANKRD52Q8NB46 1076 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 MDM1Q8TC05 714 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 NDRG1Q92597 394 aaKnown RBP9.2□□□□□ -0.94
TDP1-208ENST00000553989 SEMA4DQ92854 862 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 TMA16Q96EY4 203 aaKnown RBP9.2□□□□□ -0.94
TDP1-208ENST00000553989 CDC6Q99741 560 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 SRRTQ9BXP5 876 aaKnown RBP9.2□□□□□ -0.94
TDP1-208ENST00000553989 GTPBP4Q9BZE4 634 aaKnown RBP9.2□□□□□ -0.94
TDP1-208ENST00000553989 UBXN6Q9BZV1 441 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 BTBD1Q9H0C5 482 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 C6orf106Q9H6K1 298 aaPredicted RBP9.2□□□□□ -0.94
TDP1-208ENST00000553989 ABCB8Q9NUT2 735 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 OGFRQ9NZT2 677 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 IFNKQ9P0W0 207 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 GGA2Q9UJY4 613 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 TSPAN16Q9UKR8 245 aa9.2□□□□□ -0.94
TDP1-208ENST00000553989 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms