RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 MIEF2Q96C03 454 aa6.57□□□□□ -1.36
ATXN3-223ENST00000553686 ZBTB10Q96DT7 871 aa6.57□□□□□ -1.36
ATXN3-223ENST00000553686 RPS6KC1Q96S38 1066 aa6.57□□□□□ -1.36
ATXN3-223ENST00000553686 CLMPQ9H6B4 373 aa6.57□□□□□ -1.36
ATXN3-223ENST00000553686 DACT1Q9NYF0 836 aa6.57□□□□□ -1.36
ATXN3-223ENST00000553686 ANAPC4Q9UJX5 808 aa6.57□□□□□ -1.36
ATXN3-223ENST00000553686 KLK13Q9UKR3 277 aa6.57□□□□□ -1.36
ATXN3-223ENST00000553686 APOBEC2Q9Y235 224 aaKnown RBP6.57□□□□□ -1.36
ATXN3-223ENST00000553686 SHISA7A6NL88 538 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 TEX28O15482 410 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 MTSS1O43312 755 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 RPP40O75818 363 aaKnown RBP6.56□□□□□ -1.36
ATXN3-223ENST00000553686 AKAP3O75969 853 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 RHOBTB1O94844 696 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 FSHBP01225 129 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 LPLP06858 475 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 CCDC192P0DO97 292 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 C6P13671 934 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 SLC26A2P50443 739 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 LGALS4P56470 323 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 MRPS9P82933 396 aaKnown RBP6.56□□□□□ -1.36
ATXN3-223ENST00000553686 MGAT5Q09328 741 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 SCAPQ12770 1279 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 TRIM25Q14258 630 aaKnown RBP6.56□□□□□ -1.36
ATXN3-223ENST00000553686 ELAVL1Q15717 326 aaKnown RBP6.56□□□□□ -1.36
ATXN3-223ENST00000553686 UGT8Q16880 541 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 ASPRV1Q53RT3 343 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 C1orf228Q6PIY5 440 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 CRIP3Q6Q6R5 217 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 PLPPR4Q7Z2D5 763 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 FAM228AQ86W67 206 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 TMEM173Q86WV6 379 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-223ENST00000553686 DGKHQ86XP1 1220 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 SLC41A1Q8IVJ1 513 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 KIAA0319LQ8IZA0 1049 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 FAM9BQ8IZU0 186 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 AFAP1L2Q8N4X5 818 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 OR14C36Q8NHC7 312 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 IL17DQ8TAD2 202 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 KXD1Q9BQD3 176 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 JMJD4Q9H9V9 463 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 TMEM9BQ9NQ34 198 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 EVLQ9UI08 416 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-223ENST00000553686 ASXL3Q9C0F0 2248 aa6.56□□□□□ -1.36
ATXN3-223ENST00000553686 A0A1W2PR48 441 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 K7ESF4 209 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 CAPN9O14815 690 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 HBP1O60381 514 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 MFAP3LO75121 409 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 CAVIN2O95810 425 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 PRB1P04280 392 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 HNRNPA1P09651 372 aaKnown RBP eCLIP6.55□□□□□ -1.36
ATXN3-223ENST00000553686 SPATA31D3P0C874 917 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 MYBP10242 640 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 CPEP16870 476 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 TACR2P21452 398 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 SLC11A1P49279 550 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 SIM1P81133 766 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-223ENST00000553686 SPIDRQ14159 915 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 STAT4Q14765 748 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 ELF2Q15723 593 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 NOMO2Q5JPE7 1267 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 DGKKQ5KSL6 1271 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 CEP85Q6P2H3 762 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 SPATA31D4Q6ZUB0 917 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 GRASPQ7Z6J2 395 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-223ENST00000553686 KBTBD6Q86V97 674 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 PALB2Q86YC2 1186 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 ELOA2Q8IYF1 753 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-223ENST00000553686 TMEM57Q8N5G2 664 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 DEFB124Q8NES8 71 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 OR5M3Q8NGP4 307 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 TRAPPC12Q8WVT3 735 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 ZNF503Q96F45 646 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 ZC3H10Q96K80 434 aaKnown RBP6.55□□□□□ -1.36
ATXN3-223ENST00000553686 ZNF512Q96ME7 567 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-223ENST00000553686 FAM193BQ96PV7 902 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-223ENST00000553686 CSRNP2Q9H175 543 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 KCTD10Q9H3F6 313 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 CPVLQ9H3G5 476 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 NRDE2Q9H7Z3 1164 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 BRD9Q9H8M2 597 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.55□□□□□ -1.36
ATXN3-223ENST00000553686 AURKAIP1Q9NWT8 199 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-223ENST00000553686 PTPN13Q12923 2485 aa6.55□□□□□ -1.36
ATXN3-223ENST00000553686 FANCMQ8IYD8 2048 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 GOLGA8AA7E2F4 631 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 ZBTB5O15062 677 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 HOXA3O43365 443 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-223ENST00000553686 HMMRO75330 724 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 PARP1P09874 1014 aaKnown RBP6.54□□□□□ -1.36
ATXN3-223ENST00000553686 CHRNB1P11230 501 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 PCP11498 1178 aaKnown RBP6.54□□□□□ -1.36
ATXN3-223ENST00000553686 CASRP41180 1078 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 GLUD2P49448 558 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 DGCR2P98153 550 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 CREMQ03060 361 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 UAP1L1Q3KQV9 507 aa6.54□□□□□ -1.36
ATXN3-223ENST00000553686 GLB1L2Q8IW92 636 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms