RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 RRN3Q9NYV6 651 aa6.13□□□□□ -1.43
CCDC65-204ENST00000552188 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.13□□□□□ -1.43
CCDC65-204ENST00000552188 CYTH4Q9UIA0 394 aa6.13□□□□□ -1.43
CCDC65-204ENST00000552188 STAP1Q9ULZ2 295 aa6.13□□□□□ -1.43
CCDC65-204ENST00000552188 MMP17Q9ULZ9 603 aa6.13□□□□□ -1.43
CCDC65-204ENST00000552188 SMG5Q9UPR3 1016 aaKnown RBP6.13□□□□□ -1.43
CCDC65-204ENST00000552188 TLR6Q9Y2C9 796 aa6.13□□□□□ -1.43
CCDC65-204ENST00000552188 PAXBP1Q9Y5B6 917 aa6.13□□□□□ -1.43
CCDC65-204ENST00000552188 PLXND1Q9Y4D7 1925 aa6.13□□□□□ -1.43
CCDC65-204ENST00000552188 A0A0A0MRY4 1105 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 CCDC163A0A0D9SF12 145 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 GOLGA6L7A0A1B0GV03 622 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 TCRBV21S2A2A0A5A6 115 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 ANKRD62A6NC57 917 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 LRRC10BA6NIK2 292 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 F5H5T6 163 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 H0Y626 953 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 K7ESF4 209 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 M0QYT0 321 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 TRIM24O15164 1050 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 TEX33O43247 280 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 TIMM44O43615 452 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 SYNCRIPO60506 623 aaKnown RBP6.12□□□□□ -1.43
CCDC65-204ENST00000552188 GREM1O60565 184 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 DAB1O75553 588 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 RHOBTB1O94844 696 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 LSM8O95777 96 aaKnown RBP6.12□□□□□ -1.43
CCDC65-204ENST00000552188 F9P00740 461 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 ERBB2P04626 1255 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 TPM3P06753 285 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 FERP16591 822 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 ZNF18P17022 549 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 POLR2EP19388 210 aaKnown RBP6.12□□□□□ -1.43
CCDC65-204ENST00000552188 TNFAIP3P21580 790 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 CCR1P32246 355 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 NSFP46459 744 aaKnown RBP6.12□□□□□ -1.43
CCDC65-204ENST00000552188 RPL34P49207 117 aaKnown RBP6.12□□□□□ -1.43
CCDC65-204ENST00000552188 ST8SIA6P61647 398 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 CDR2Q01850 454 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 DEUP1Q05D60 604 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 DMWDQ09019 674 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 NNTQ13423 1086 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 CDH18Q13634 790 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 ARID5BQ14865 1188 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 NCAPHQ15003 741 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 TAF5Q15542 800 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 ELF2Q15723 593 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 ASIC2Q16515 512 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 GAB4Q2WGN9 574 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 PTPN20Q4JDL3 420 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 ZC3H12AQ5D1E8 599 aaKnown RBP6.12□□□□□ -1.43
CCDC65-204ENST00000552188 FYB2Q5VWT5 728 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 SYPL2Q5VXT5 272 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 NAA35Q5VZE5 725 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 RNF219Q5W0B1 726 aaPredicted RBP6.12□□□□□ -1.43
CCDC65-204ENST00000552188 EGFLAMQ63HQ2 1017 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 LAIR1Q6GTX8 287 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 RFWD3Q6PCD5 774 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 BEND5Q7L4P6 421 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 NOP9Q86U38 636 aaKnown RBP6.12□□□□□ -1.43
CCDC65-204ENST00000552188 TAC4Q86UU9 113 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 C11orf74Q86VG3 221 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 MFN1Q8IWA4 741 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 ETFBKMTQ8IXQ9 262 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 LGI2Q8N0V4 545 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 DOCK4Q8N1I0 1966 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 WDTC1Q8N5D0 677 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 GPR161Q8N6U8 529 aaKnown RBP6.12□□□□□ -1.43
CCDC65-204ENST00000552188 IL17RCQ8NAC3 791 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 HJURPQ8NCD3 748 aaPredicted RBP6.12□□□□□ -1.43
CCDC65-204ENST00000552188 ZNF397Q8NF99 534 aaPredicted RBP6.12□□□□□ -1.43
CCDC65-204ENST00000552188 WFIKKN2Q8TEU8 576 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 SLC20A1Q8WUM9 679 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 HMGB4Q8WW32 186 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 EZH1Q92800 747 aaPredicted RBP6.12□□□□□ -1.43
CCDC65-204ENST00000552188 AZIN2Q96A70 460 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 BTN2A3PQ96KV6 586 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 ERGIC2Q96RQ1 377 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 IRX2Q9BZI1 471 aaPredicted RBP6.12□□□□□ -1.43
CCDC65-204ENST00000552188 TPSD1Q9BZJ3 242 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 SIK2Q9H0K1 926 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 EPC1Q9H2F5 836 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 WDCPQ9H6R7 721 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 CBX8Q9HC52 389 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 POLR3BQ9NW08 1133 aaPredicted RBP6.12□□□□□ -1.43
CCDC65-204ENST00000552188 TMEM51Q9NW97 253 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 C2orf42Q9NWW7 574 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 USP18Q9UMW8 372 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 PLA2G4CQ9UP65 541 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 SIK3Q9Y2K2 1263 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 STARD13Q9Y3M8 1113 aa6.12□□□□□ -1.43
CCDC65-204ENST00000552188 POM121CA8CG34 1229 aa6.11□□□□□ -1.43
CCDC65-204ENST00000552188 KCNU1A8MYU2 1149 aa6.11□□□□□ -1.43
CCDC65-204ENST00000552188 SGK1O00141 431 aa6.11□□□□□ -1.43
CCDC65-204ENST00000552188 GFRA2O00451 464 aa6.11□□□□□ -1.43
CCDC65-204ENST00000552188 NPC1O15118 1278 aa6.11□□□□□ -1.43
CCDC65-204ENST00000552188 LILRB5O75023 590 aa6.11□□□□□ -1.43
CCDC65-204ENST00000552188 PENKP01210 267 aaPredicted RBP6.11□□□□□ -1.43
CCDC65-204ENST00000552188 IGLV3-27P01718 113 aa6.11□□□□□ -1.43
CCDC65-204ENST00000552188 FYNP06241 537 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms