RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 AFPP02771 609 aaKnown RBP15.08■□□□□ 0
VPS29-209ENST00000551655 IDEP14735 1019 aa15.08■□□□□ 0
VPS29-209ENST00000551655 GAP43P17677 238 aa15.08■□□□□ 0
VPS29-209ENST00000551655 CR2P20023 1033 aa15.08■□□□□ 0
VPS29-209ENST00000551655 SGSHP51688 502 aa15.08■□□□□ 0
VPS29-209ENST00000551655 ZNF211Q13398 564 aaPredicted RBP15.08■□□□□ 0
VPS29-209ENST00000551655 TRPC3Q13507 836 aa15.08■□□□□ 0
VPS29-209ENST00000551655 E2F5Q15329 346 aa15.08■□□□□ 0
VPS29-209ENST00000551655 SURF1Q15526 300 aa15.08■□□□□ 0
VPS29-209ENST00000551655 C4orf17Q53FE4 359 aa15.08■□□□□ 0
VPS29-209ENST00000551655 MBLAC2Q68D91 279 aa15.08■□□□□ 0
VPS29-209ENST00000551655 FOXR1Q6PIV2 292 aa15.08■□□□□ 0
VPS29-209ENST00000551655 CLEC20AQ6ZU45 233 aa15.08■□□□□ 0
VPS29-209ENST00000551655 CPXM2Q8N436 756 aa15.08■□□□□ 0
VPS29-209ENST00000551655 HPS3Q969F9 1004 aa15.08■□□□□ 0
VPS29-209ENST00000551655 EPSTI1Q96J88 318 aa15.08■□□□□ 0
VPS29-209ENST00000551655 TNIP3Q96KP6 325 aa15.08■□□□□ 0
VPS29-209ENST00000551655 CGRRF1Q99675 332 aa15.08■□□□□ 0
VPS29-209ENST00000551655 FBRSQ9HAH7 460 aa15.08■□□□□ 0
VPS29-209ENST00000551655 KCNK4Q9NYG8 393 aa15.08■□□□□ 0
VPS29-209ENST00000551655 GGA2Q9UJY4 613 aa15.08■□□□□ 0
VPS29-209ENST00000551655 PAXBP1Q9Y5B6 917 aa15.08■□□□□ 0
VPS29-209ENST00000551655 LRRC72A6NJI9 287 aa15.07■□□□□ 0
VPS29-209ENST00000551655 RBMS1P29558 406 aaKnown RBP15.07■□□□□ 0
VPS29-209ENST00000551655 CST6Q15828 149 aa15.07■□□□□ 0
VPS29-209ENST00000551655 ARL13BQ3SXY8 428 aa15.07■□□□□ 0
VPS29-209ENST00000551655 MMAAQ8IVH4 418 aaKnown RBP15.07■□□□□ 0
VPS29-209ENST00000551655 OXR1Q8N573 874 aa15.07■□□□□ 0
VPS29-209ENST00000551655 AADATQ8N5Z0 425 aa15.07■□□□□ 0
VPS29-209ENST00000551655 GOLGA1Q92805 767 aa15.07■□□□□ 0
VPS29-209ENST00000551655 ATXN7L3BQ96GX2 97 aa15.07■□□□□ 0
VPS29-209ENST00000551655 MYO19Q96H55 970 aa15.07■□□□□ 0
VPS29-209ENST00000551655 PRR11Q96HE9 360 aaPredicted RBP15.07■□□□□ 0
VPS29-209ENST00000551655 SLC46A1Q96NT5 459 aa15.07■□□□□ 0
VPS29-209ENST00000551655 OLFML3Q9NRN5 406 aa15.07■□□□□ 0
VPS29-209ENST00000551655 SLC12A8A0AV02 714 aa15.06■□□□□ 0
VPS29-209ENST00000551655 CASC3O15234 703 aaKnown RBP15.06■□□□□ 0
VPS29-209ENST00000551655 STAU1O95793 577 aaKnown RBP15.06■□□□□ 0
VPS29-209ENST00000551655 DLDP09622 509 aaKnown RBP15.06■□□□□ 0
VPS29-209ENST00000551655 FAM200BP0CF97 657 aa15.06■□□□□ 0
VPS29-209ENST00000551655 GIMD1P0DJR0 217 aa15.06■□□□□ 0
VPS29-209ENST00000551655 PABPC1P11940 636 aaKnown RBP15.06■□□□□ 0
VPS29-209ENST00000551655 MAT2AP31153 395 aaKnown RBP15.06■□□□□ 0
VPS29-209ENST00000551655 CD70P32970 193 aa15.06■□□□□ 0
VPS29-209ENST00000551655 HOXD13P35453 343 aa15.06■□□□□ 0
VPS29-209ENST00000551655 CASP4P49662 377 aa15.06■□□□□ 0
VPS29-209ENST00000551655 CCR5P51681 352 aa15.06■□□□□ 0
VPS29-209ENST00000551655 NDST1P52848 882 aa15.06■□□□□ 0
VPS29-209ENST00000551655 ADPRHP54922 357 aa15.06■□□□□ 0
VPS29-209ENST00000551655 SNRNP35Q16560 246 aaKnown RBP15.06■□□□□ 0
VPS29-209ENST00000551655 ISXQ2M1V0 245 aa15.06■□□□□ 0
VPS29-209ENST00000551655 SLC45A4Q5BKX6 768 aa15.06■□□□□ 0
VPS29-209ENST00000551655 FAM217AQ8IXS0 508 aa15.06■□□□□ 0
VPS29-209ENST00000551655 OR4C6Q8NH72 309 aa15.06■□□□□ 0
VPS29-209ENST00000551655 OR14C36Q8NHC7 312 aa15.06■□□□□ 0
VPS29-209ENST00000551655 WFIKKN2Q8TEU8 576 aa15.06■□□□□ 0
VPS29-209ENST00000551655 OMDQ99983 421 aa15.06■□□□□ 0
VPS29-209ENST00000551655 ARHGAP9Q9BRR9 750 aa15.06■□□□□ 0
VPS29-209ENST00000551655 DCLK3Q9C098 648 aa15.06■□□□□ 0
VPS29-209ENST00000551655 LY6G6EA0A0G2JKS1 128 aa15.05■□□□□ -0
VPS29-209ENST00000551655 CKMT1AP12532 417 aa15.05■□□□□ -0
VPS29-209ENST00000551655 DGKAP23743 735 aa15.05■□□□□ -0
VPS29-209ENST00000551655 PSMD8P48556 350 aa15.05■□□□□ -0
VPS29-209ENST00000551655 COG7P83436 770 aa15.05■□□□□ -0
VPS29-209ENST00000551655 CYP24A1Q07973 514 aa15.05■□□□□ -0
VPS29-209ENST00000551655 PSMD6Q15008 389 aa15.05■□□□□ -0
VPS29-209ENST00000551655 ZNF699Q32M78 642 aa15.05■□□□□ -0
VPS29-209ENST00000551655 POM121L1PQ3SYA9 428 aa15.05■□□□□ -0
VPS29-209ENST00000551655 NAPEPLDQ6IQ20 393 aa15.05■□□□□ -0
VPS29-209ENST00000551655 KIAA0907Q7Z7F0 614 aaPredicted RBP15.05■□□□□ -0
VPS29-209ENST00000551655 AHI1Q8N157 1196 aa15.05■□□□□ -0
VPS29-209ENST00000551655 MFSD2AQ8NA29 543 aa15.05■□□□□ -0
VPS29-209ENST00000551655 SYAP1Q96A49 352 aaPredicted RBP15.05■□□□□ -0
VPS29-209ENST00000551655 TWNKQ96RR1 684 aa15.05■□□□□ -0
VPS29-209ENST00000551655 CCNL2Q96S94 520 aaPredicted RBP15.05■□□□□ -0
VPS29-209ENST00000551655 MARCH2Q9P0N8 246 aa15.05■□□□□ -0
VPS29-209ENST00000551655 SUN2Q9UH99 717 aa15.05■□□□□ -0
VPS29-209ENST00000551655 KIF3AQ9Y496 699 aa15.05■□□□□ -0
VPS29-209ENST00000551655 PCDHA5Q9Y5H7 936 aa15.05■□□□□ -0
VPS29-209ENST00000551655 U3KQA8 63 aa15.05■□□□□ -0
VPS29-209ENST00000551655 CDRT15L2A8MXV6 281 aa15.04■□□□□ -0
VPS29-209ENST00000551655 KIAA0391O15091 583 aaKnown RBP15.04■□□□□ -0
VPS29-209ENST00000551655 PHACTR2O75167 634 aa15.04■□□□□ -0
VPS29-209ENST00000551655 KIF20AO95235 890 aa15.04■□□□□ -0
VPS29-209ENST00000551655 RALAP11233 206 aa15.04■□□□□ -0
VPS29-209ENST00000551655 TGM2P21980 687 aa15.04■□□□□ -0
VPS29-209ENST00000551655 SLC8A1P32418 973 aa15.04■□□□□ -0
VPS29-209ENST00000551655 LONP1P36776 959 aaKnown RBP15.04■□□□□ -0
VPS29-209ENST00000551655 CYP2J2P51589 502 aa15.04■□□□□ -0
VPS29-209ENST00000551655 KIF11P52732 1056 aa15.04■□□□□ -0
VPS29-209ENST00000551655 METAP1P53582 386 aa15.04■□□□□ -0
VPS29-209ENST00000551655 MPPE1Q53F39 396 aa15.04■□□□□ -0
VPS29-209ENST00000551655 SGO2Q562F6 1265 aa15.04■□□□□ -0
VPS29-209ENST00000551655 ZNF667Q5HYK9 610 aa15.04■□□□□ -0
VPS29-209ENST00000551655 CRTC1Q6UUV9 634 aa15.04■□□□□ -0
VPS29-209ENST00000551655 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.04■□□□□ -0
VPS29-209ENST00000551655 MAPK15Q8TD08 544 aa15.04■□□□□ -0
VPS29-209ENST00000551655 PLEKHO2Q8TD55 490 aa15.04■□□□□ -0
VPS29-209ENST00000551655 APOLD1Q96LR9 279 aa15.04■□□□□ -0
VPS29-209ENST00000551655 MYOCQ99972 504 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms