RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 APRTP07741 180 aa20.29■□□□□ 0.84
SSH1-209ENST00000551165 GPX6P59796 221 aa20.29■□□□□ 0.84
SSH1-209ENST00000551165 WASHC5Q12768 1159 aa20.29■□□□□ 0.84
SSH1-209ENST00000551165 AUHQ13825 339 aaKnown RBP20.29■□□□□ 0.84
SSH1-209ENST00000551165 BBS9Q3SYG4 887 aa20.29■□□□□ 0.84
SSH1-209ENST00000551165 ANKRD20A2Q5SQ80 823 aa20.29■□□□□ 0.84
SSH1-209ENST00000551165 ANKRD20A1Q5TYW2 823 aa20.29■□□□□ 0.84
SSH1-209ENST00000551165 ANKRD20A3Q5VUR7 823 aa20.29■□□□□ 0.84
SSH1-209ENST00000551165 MSANTD2Q6P1R3 559 aa20.29■□□□□ 0.84
SSH1-209ENST00000551165 SLC39A13Q96H72 371 aa20.29■□□□□ 0.84
SSH1-209ENST00000551165 SERPINB11Q96P15 392 aa20.29■□□□□ 0.84
SSH1-209ENST00000551165 HAPLN3Q96S86 360 aa20.29■□□□□ 0.84
SSH1-209ENST00000551165 KLC2Q9H0B6 622 aa20.29■□□□□ 0.84
SSH1-209ENST00000551165 CLUHO75153 1309 aa20.29■□□□□ 0.84
SSH1-209ENST00000551165 HACD1B0YJ81 288 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 RNF103O00237 685 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 RASGRF2O14827 1237 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 RTN3O95197 1032 aaPredicted RBP20.28■□□□□ 0.84
SSH1-209ENST00000551165 HMBSP08397 361 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 ARL4CP56559 192 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 SMARCB1Q12824 385 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 PPP2R5DQ14738 602 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 PIK3R6Q5UE93 754 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 EXOC4Q96A65 974 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 YME1L1Q96TA2 773 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 TMEM109Q9BVC6 243 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 NR1D1P20393 614 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 GRIA1P42261 906 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 RPL10AP62906 217 aaKnown RBP20.28■□□□□ 0.84
SSH1-209ENST00000551165 DSG1Q02413 1049 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 PDK1Q15118 436 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 C10orf120Q5SQS8 335 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 AGBL2Q5U5Z8 902 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 C2orf15Q8WU43 125 aaKnown RBP20.28■□□□□ 0.84
SSH1-209ENST00000551165 TLCD1Q96CP7 247 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 MPP6Q9NZW5 540 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 TLR6Q9Y2C9 796 aa20.28■□□□□ 0.84
SSH1-209ENST00000551165 A0A0A0MRY4 1105 aa20.27■□□□□ 0.84
SSH1-209ENST00000551165 ZBBXA8MT70 800 aa20.27■□□□□ 0.84
SSH1-209ENST00000551165 CHADO15335 359 aa20.27■□□□□ 0.84
SSH1-209ENST00000551165 SSTR1P30872 391 aa20.27■□□□□ 0.84
SSH1-209ENST00000551165 LMAN1P49257 510 aa20.27■□□□□ 0.84
SSH1-209ENST00000551165 GLUD2P49448 558 aa20.27■□□□□ 0.84
SSH1-209ENST00000551165 IRAK1P51617 712 aa20.27■□□□□ 0.84
SSH1-209ENST00000551165 TBX4P57082 545 aa20.27■□□□□ 0.84
SSH1-209ENST00000551165 MANEALQ5VSG8 457 aa20.27■□□□□ 0.84
SSH1-209ENST00000551165 BZW1Q7L1Q6 419 aaKnown RBP20.27■□□□□ 0.84
SSH1-209ENST00000551165 CAND1Q86VP6 1230 aaKnown RBP20.27■□□□□ 0.84
SSH1-209ENST00000551165 CMTR2Q8IYT2 770 aaKnown RBP20.27■□□□□ 0.84
SSH1-209ENST00000551165 ARHGAP18Q8N392 663 aa20.27■□□□□ 0.84
SSH1-209ENST00000551165 FBXO36Q8NEA4 188 aa20.27■□□□□ 0.84
SSH1-209ENST00000551165 SPATA13Q96N96 652 aa20.27■□□□□ 0.84
SSH1-209ENST00000551165 PRDM16Q9HAZ2 1276 aa20.27■□□□□ 0.84
SSH1-209ENST00000551165 TLR8Q9NR97 1041 aaKnown RBP20.27■□□□□ 0.84
SSH1-209ENST00000551165 CXXC1Q9P0U4 656 aaPredicted RBP20.27■□□□□ 0.84
SSH1-209ENST00000551165 E7ESA3 106 aa20.27■□□□□ 0.83
SSH1-209ENST00000551165 CCDC38Q502W7 563 aa20.27■□□□□ 0.83
SSH1-209ENST00000551165 ARHGAP36Q6ZRI8 547 aa20.27■□□□□ 0.83
SSH1-209ENST00000551165 ZNF567Q8N184 647 aa20.27■□□□□ 0.83
SSH1-209ENST00000551165 ZNF461Q8TAF7 563 aa20.27■□□□□ 0.83
SSH1-209ENST00000551165 SERPINB12Q96P63 405 aa20.27■□□□□ 0.83
SSH1-209ENST00000551165 OXCT2Q9BYC2 517 aaPredicted RBP20.27■□□□□ 0.83
SSH1-209ENST00000551165 IL23AQ9NPF7 189 aa20.27■□□□□ 0.83
SSH1-209ENST00000551165 CLIC5Q9NZA1 410 aa20.27■□□□□ 0.83
SSH1-209ENST00000551165 SPG21Q9NZD8 308 aa20.27■□□□□ 0.83
SSH1-209ENST00000551165 ZMYND8Q9ULU4 1186 aaPredicted RBP20.27■□□□□ 0.83
SSH1-209ENST00000551165 ABLIM3O94929 683 aa20.26■□□□□ 0.83
SSH1-209ENST00000551165 ZDHHC11BP0C7U3 371 aa20.26■□□□□ 0.83
SSH1-209ENST00000551165 ARHGEF18Q6ZSZ5 1173 aa20.26■□□□□ 0.83
SSH1-209ENST00000551165 CYP4X1Q8N118 509 aa20.26■□□□□ 0.83
SSH1-209ENST00000551165 VPS52Q8N1B4 723 aa20.26■□□□□ 0.83
SSH1-209ENST00000551165 PGM2Q96G03 612 aa20.26■□□□□ 0.83
SSH1-209ENST00000551165 VPS37BQ9H9H4 285 aa20.26■□□□□ 0.83
SSH1-209ENST00000551165 CYP4F11Q9HBI6 524 aa20.26■□□□□ 0.83
SSH1-209ENST00000551165 MARCH2Q9P0N8 246 aa20.26■□□□□ 0.83
SSH1-209ENST00000551165 CHMP2BQ9UQN3 213 aa20.26■□□□□ 0.83
SSH1-209ENST00000551165 PPP1R12AO14974 1030 aaPredicted RBP20.26■□□□□ 0.83
SSH1-209ENST00000551165 RGS16O15492 202 aaPredicted RBP20.26■□□□□ 0.83
SSH1-209ENST00000551165 ELK3P41970 407 aa20.26■□□□□ 0.83
SSH1-209ENST00000551165 TUBP50607 506 aa20.26■□□□□ 0.83
SSH1-209ENST00000551165 ZNF534Q76KX8 674 aa20.26■□□□□ 0.83
SSH1-209ENST00000551165 PDIK1LQ8N165 341 aa20.26■□□□□ 0.83
SSH1-209ENST00000551165 PYROXD1Q8WU10 500 aa20.26■□□□□ 0.83
SSH1-209ENST00000551165 BADQ92934 168 aa20.26■□□□□ 0.83
SSH1-209ENST00000551165 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.26■□□□□ 0.83
SSH1-209ENST00000551165 AFF4Q9UHB7 1163 aaKnown RBP20.26■□□□□ 0.83
SSH1-209ENST00000551165 SHROOM3Q8TF72 1996 aa20.25■□□□□ 0.83
SSH1-209ENST00000551165 KIAA1671Q9BY89 1806 aa20.25■□□□□ 0.83
SSH1-209ENST00000551165 E9PAM4 449 aa20.25■□□□□ 0.83
SSH1-209ENST00000551165 LAG3P18627 525 aa20.25■□□□□ 0.83
SSH1-209ENST00000551165 GCAP28676 217 aa20.25■□□□□ 0.83
SSH1-209ENST00000551165 MLLT6P55198 1093 aaPredicted RBP20.25■□□□□ 0.83
SSH1-209ENST00000551165 GALNT2Q10471 571 aa20.25■□□□□ 0.83
SSH1-209ENST00000551165 C6orf118Q5T5N4 469 aa20.25■□□□□ 0.83
SSH1-209ENST00000551165 HERC2P3Q9BVR0 1158 aa20.25■□□□□ 0.83
SSH1-209ENST00000551165 TBK1Q9UHD2 729 aa20.25■□□□□ 0.83
SSH1-209ENST00000551165 VANGL2Q9ULK5 521 aa20.25■□□□□ 0.83
SSH1-209ENST00000551165 SLC12A8A0AV02 714 aa20.24■□□□□ 0.83
SSH1-209ENST00000551165 NDC80O14777 642 aa20.24■□□□□ 0.83
SSH1-209ENST00000551165 TLR5O60602 858 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms