RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 C5orf60A6NFR6 353 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 C2CD2LO14523 706 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 PRRG1O14668 218 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 CHADO15335 359 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 TLL1O43897 1013 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 LPXNO60711 386 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 LILRB3O75022 631 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 GCATO75600 419 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 FAM153BP0C7A2 387 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 PFKLP17858 780 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 ERCC2P18074 760 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 AMPD1P23109 780 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 ATP5C1P36542 298 aaKnown RBP12.97□□□□□ -0.33
CACNB3-217ENST00000550483 PMS2P54278 862 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 CBLBQ13191 982 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 GRIN2CQ14957 1233 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 TRADDQ15628 312 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 FAM153CQ494X1 144 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 PDE12Q6L8Q7 609 aaKnown RBP12.97□□□□□ -0.33
CACNB3-217ENST00000550483 LRRC31Q6UY01 552 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 TTC9BQ8N6N2 239 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 TTC25Q96NG3 672 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 PPP1R2P1Q96PQ5 205 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 VAT1Q99536 393 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 TXLNGYQ9BZA5 131 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 NEUROG2Q9H2A3 272 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 CRISPLD1Q9H336 500 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 PABPC3Q9H361 631 aaKnown RBP12.97□□□□□ -0.33
CACNB3-217ENST00000550483 DTLQ9NZJ0 730 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 MARCH2Q9P0N8 246 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 FAM153AQ9UHL3 310 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 DNMT3LQ9UJW3 386 aa12.97□□□□□ -0.33
CACNB3-217ENST00000550483 TMEM265A0A087WTH1 108 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 GOLGA6L10A6NI86 522 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 WASH4PA8MWX3 477 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 KCNN4O15554 427 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 ADAM12O43184 909 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 TLR5O60602 858 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 OPHN1O60890 802 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 LRIG2O94898 1065 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 FGF19O95750 216 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 IGLV3-27P01718 113 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 NUDT17P0C025 328 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 TSHRP16473 764 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 RPL17P18621 184 aaKnown RBP12.96□□□□□ -0.33
CACNB3-217ENST00000550483 EPHB2P29323 1055 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 BMPR1AP36894 532 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 FDFT1P37268 417 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 MLLT6P55198 1093 aaPredicted RBP12.96□□□□□ -0.33
CACNB3-217ENST00000550483 USP46P62068 366 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 CDK16Q00536 496 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 GBE1Q04446 702 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 PRKD1Q15139 912 aaPredicted RBP12.96□□□□□ -0.33
CACNB3-217ENST00000550483 TJAP1Q5JTD0 557 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 C10orf120Q5SQS8 335 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 HECTD3Q5T447 861 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 RNASEH2BQ5TBB1 312 aaKnown RBP12.96□□□□□ -0.33
CACNB3-217ENST00000550483 RASIP1Q5U651 963 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 MANEALQ5VSG8 457 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 SDHAF4Q5VUM1 108 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 ELMSAN1Q6PJG2 1045 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 CENPUQ71F23 418 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 ZC3H18Q86VM9 953 aaKnown RBP12.96□□□□□ -0.33
CACNB3-217ENST00000550483 IQCKQ8N0W5 287 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 CNPY4Q8N129 248 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 PYROXD2Q8N2H3 581 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 ELMOD1Q8N336 334 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 FAM71DQ8N9W8 422 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 HTR3CQ8WXA8 447 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 PPM1EQ8WY54 764 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 PSMG2Q969U7 264 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 AZIN2Q96A70 460 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 PLD4Q96BZ4 506 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 HDAC11Q96DB2 347 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 FCRL2Q96LA5 508 aaPredicted RBP12.96□□□□□ -0.33
CACNB3-217ENST00000550483 ZNF512Q96ME7 567 aaPredicted RBP12.96□□□□□ -0.33
CACNB3-217ENST00000550483 FAM118BQ9BPY3 351 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 HINFPQ9BQA5 517 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 USP29Q9HBJ7 922 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 SAE1Q9UBE0 346 aaPredicted RBP12.96□□□□□ -0.33
CACNB3-217ENST00000550483 SFMBT1Q9UHJ3 866 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 DPP7Q9UHL4 492 aa12.96□□□□□ -0.33
CACNB3-217ENST00000550483 FARP1Q9Y4F1 1045 aaPredicted RBP12.96□□□□□ -0.33
CACNB3-217ENST00000550483 ZNF840PA6NDX5 716 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 GOLGA8KD6RF30 607 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 C5orf67F2Z3F1 127 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 TEX28O15482 410 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 PAGE1O75459 146 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 LATS1O95835 1130 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 LINC00271P0C7V0 271 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 RPL22P35268 128 aaKnown RBP12.95□□□□□ -0.34
CACNB3-217ENST00000550483 HSD17B3P37058 310 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 PLA2G5P39877 138 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 MAGEA6P43360 314 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 VPS41P49754 854 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 ARL4CP56559 192 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 SARNPP82979 210 aaKnown RBP12.95□□□□□ -0.34
CACNB3-217ENST00000550483 SMAD3P84022 425 aaKnown RBP12.95□□□□□ -0.34
CACNB3-217ENST00000550483 GALNT2Q10471 571 aa12.95□□□□□ -0.34
CACNB3-217ENST00000550483 EFEMP1Q12805 493 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms