RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 CDX4O14627 284 aaPredicted RBP20.68■□□□□ 0.9
GCN1-207ENST00000550471 TRUB2O95900 331 aaKnown RBP20.68■□□□□ 0.9
GCN1-207ENST00000550471 CFIP05156 583 aa20.68■□□□□ 0.9
GCN1-207ENST00000550471 TPM2P07951 284 aa20.68■□□□□ 0.9
GCN1-207ENST00000550471 ENGP17813 658 aa20.68■□□□□ 0.9
GCN1-207ENST00000550471 CDH18Q13634 790 aa20.68■□□□□ 0.9
GCN1-207ENST00000550471 MS4A13Q5J8X5 152 aa20.68■□□□□ 0.9
GCN1-207ENST00000550471 ACBD5Q5T8D3 534 aaPredicted RBP20.68■□□□□ 0.9
GCN1-207ENST00000550471 TMEM215Q68D42 235 aa20.68■□□□□ 0.9
GCN1-207ENST00000550471 ADIPOR2Q86V24 386 aa20.68■□□□□ 0.9
GCN1-207ENST00000550471 HDDC3Q8N4P3 179 aa20.68■□□□□ 0.9
GCN1-207ENST00000550471 C1orf131Q8NDD1 294 aaKnown RBP20.68■□□□□ 0.9
GCN1-207ENST00000550471 TTC17Q96AE7 1141 aa20.68■□□□□ 0.9
GCN1-207ENST00000550471 HSPA12BQ96MM6 686 aa20.68■□□□□ 0.9
GCN1-207ENST00000550471 MKRN2Q9H000 416 aaKnown RBP20.68■□□□□ 0.9
GCN1-207ENST00000550471 TMEM74BQ9NUR3 256 aa20.68■□□□□ 0.9
GCN1-207ENST00000550471 KIAA1522Q9P206 1035 aaPredicted RBP20.68■□□□□ 0.9
GCN1-207ENST00000550471 DNAJC12Q9UKB3 198 aa20.68■□□□□ 0.9
GCN1-207ENST00000550471 DAAM1Q9Y4D1 1078 aa20.68■□□□□ 0.9
GCN1-207ENST00000550471 CNOT1A5YKK6 2376 aaKnown RBP20.68■□□□□ 0.9
GCN1-207ENST00000550471 PATE3B3GLJ2 98 aa20.67■□□□□ 0.9
GCN1-207ENST00000550471 IGLV3-25P01717 112 aa20.67■□□□□ 0.9
GCN1-207ENST00000550471 ABCB4P21439 1286 aa20.67■□□□□ 0.9
GCN1-207ENST00000550471 CCR1P32246 355 aa20.67■□□□□ 0.9
GCN1-207ENST00000550471 TPMTP51580 245 aa20.67■□□□□ 0.9
GCN1-207ENST00000550471 ARID5BQ14865 1188 aa20.67■□□□□ 0.9
GCN1-207ENST00000550471 TTC31Q49AM3 519 aaPredicted RBP20.67■□□□□ 0.9
GCN1-207ENST00000550471 RFWD3Q6PCD5 774 aa20.67■□□□□ 0.9
GCN1-207ENST00000550471 C11orf57Q6ZUT1 292 aaPredicted RBP20.67■□□□□ 0.9
GCN1-207ENST00000550471 TAC4Q86UU9 113 aa20.67■□□□□ 0.9
GCN1-207ENST00000550471 RGL4Q8IZJ4 473 aa20.67■□□□□ 0.9
GCN1-207ENST00000550471 DNASE2BQ8WZ79 361 aa20.67■□□□□ 0.9
GCN1-207ENST00000550471 TOE1Q96GM8 510 aaKnown RBP20.67■□□□□ 0.9
GCN1-207ENST00000550471 GBP4Q96PP9 640 aa20.67■□□□□ 0.9
GCN1-207ENST00000550471 CAPN10Q9HC96 672 aa20.67■□□□□ 0.9
GCN1-207ENST00000550471 PAXBP1Q9Y5B6 917 aa20.67■□□□□ 0.9
GCN1-207ENST00000550471 SPTBN2O15020 2390 aa20.67■□□□□ 0.9
GCN1-207ENST00000550471 DNAH14Q0VDD8 3507 aa20.66■□□□□ 0.9
GCN1-207ENST00000550471 MEI4A8MW99 385 aa20.66■□□□□ 0.9
GCN1-207ENST00000550471 GOLGA6L22H0YM25 854 aa20.66■□□□□ 0.9
GCN1-207ENST00000550471 ARHGAP33O14559 1287 aa20.66■□□□□ 0.9
GCN1-207ENST00000550471 RNASEH1O60930 286 aaKnown RBP20.66■□□□□ 0.9
GCN1-207ENST00000550471 SRPRAP08240 638 aaKnown RBP20.66■□□□□ 0.9
GCN1-207ENST00000550471 PRKCHP24723 683 aa20.66■□□□□ 0.9
GCN1-207ENST00000550471 SLC6A4P31645 630 aa20.66■□□□□ 0.9
GCN1-207ENST00000550471 NOVA1P51513 510 aaKnown RBP20.66■□□□□ 0.9
GCN1-207ENST00000550471 COPAP53621 1224 aa20.66■□□□□ 0.9
GCN1-207ENST00000550471 SHC2P98077 582 aa20.66■□□□□ 0.9
GCN1-207ENST00000550471 SLC14A1Q13336 389 aa20.66■□□□□ 0.9
GCN1-207ENST00000550471 DPCR1Q3MIW9 517 aa20.66■□□□□ 0.9
GCN1-207ENST00000550471 RABGAP1LQ5R372 815 aa20.66■□□□□ 0.9
GCN1-207ENST00000550471 FAM71AQ8IYT1 594 aa20.66■□□□□ 0.9
GCN1-207ENST00000550471 MSANTD4Q8NCY6 345 aa20.66■□□□□ 0.9
GCN1-207ENST00000550471 SLC2A13Q96QE2 648 aa20.66■□□□□ 0.9
GCN1-207ENST00000550471 SYNCQ9H7C4 482 aa20.66■□□□□ 0.9
GCN1-207ENST00000550471 ANGPTL2Q9UKU9 493 aa20.66■□□□□ 0.9
GCN1-207ENST00000550471 A0A1B0GTW7 788 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 KCNU1A8MYU2 1149 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 F5H5T6 163 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 OPHN1O60890 802 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 LUC7L3O95232 432 aaKnown RBP20.65■□□□□ 0.9
GCN1-207ENST00000550471 CALCAP01258 141 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 DNTTP04053 509 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 KCNA4P22459 653 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 SCNN1AP37088 669 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 NNMTP40261 264 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 SULT2A1Q06520 285 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 DCAF6Q58WW2 860 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 SYPL2Q5VXT5 272 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 NADSYN1Q6IA69 706 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 GJB7Q6PEY0 223 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 SLC26A9Q7LBE3 791 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 SLC41A1Q8IVJ1 513 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 TMEM35BQ8NCS4 154 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 ZNF397Q8NF99 534 aaPredicted RBP20.65■□□□□ 0.9
GCN1-207ENST00000550471 SORCS1Q8WY21 1168 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 PDCL3Q9H2J4 239 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 FAM204AQ9H8W3 233 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 CYTH4Q9UIA0 394 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 TPX2Q9ULW0 747 aaKnown RBP20.65■□□□□ 0.9
GCN1-207ENST00000550471 CKAP5Q14008 2032 aa20.65■□□□□ 0.9
GCN1-207ENST00000550471 TNRC6BQ9UPQ9 1833 aaKnown RBP20.64■□□□□ 0.9
GCN1-207ENST00000550471 GOLGA6L7A0A1B0GV03 622 aa20.64■□□□□ 0.89
GCN1-207ENST00000550471 TARSL2A2RTX5 802 aaKnown RBP20.64■□□□□ 0.89
GCN1-207ENST00000550471 METTL12A8MUP2 240 aa20.64■□□□□ 0.89
GCN1-207ENST00000550471 KCNJ18B7U540 433 aa20.64■□□□□ 0.89
GCN1-207ENST00000550471 H0Y626 953 aa20.64■□□□□ 0.89
GCN1-207ENST00000550471 PMLP29590 882 aa20.64■□□□□ 0.89
GCN1-207ENST00000550471 RDXP35241 583 aaKnown RBP20.64■□□□□ 0.89
GCN1-207ENST00000550471 EIF4EBP2Q13542 120 aaPredicted RBP20.64■□□□□ 0.89
GCN1-207ENST00000550471 KCNJ12Q14500 433 aa20.64■□□□□ 0.89
GCN1-207ENST00000550471 PTPRNQ16849 979 aa20.64■□□□□ 0.89
GCN1-207ENST00000550471 N4BP2L1Q5TBK1 243 aaPredicted RBP20.64■□□□□ 0.89
GCN1-207ENST00000550471 PSAPL1Q6NUJ1 521 aa20.64■□□□□ 0.89
GCN1-207ENST00000550471 IL27RAQ6UWB1 636 aa20.64■□□□□ 0.89
GCN1-207ENST00000550471 CHSY1Q86X52 802 aa20.64■□□□□ 0.89
GCN1-207ENST00000550471 CARNMT1Q8N4J0 409 aa20.64■□□□□ 0.89
GCN1-207ENST00000550471 ENOX1Q8TC92 643 aaKnown RBP20.64■□□□□ 0.89
GCN1-207ENST00000550471 RNF34Q969K3 372 aa20.64■□□□□ 0.89
GCN1-207ENST00000550471 CPXM1Q96SM3 734 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms