RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 FUT11Q495W5 492 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 ZNF394Q53GI3 561 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 WDR45BQ5MNZ6 344 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 KIAA1324Q6UXG2 1013 aaKnown RBP7.98□□□□□ -1.13
NEK3-201ENST00000550331 KRBA2Q6ZNG9 492 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 RSRC2Q7L4I2 434 aaKnown RBP7.98□□□□□ -1.13
NEK3-201ENST00000550331 ANKS1BQ7Z6G8 1248 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 PIGZQ86VD9 579 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 HOMEZQ8IX15 550 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 FAM217AQ8IXS0 508 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 ANKRD52Q8NB46 1076 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 SLC4A11Q8NBS3 891 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 CADM4Q8NFZ8 388 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 UCMAQ8WVF2 138 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 DNASE2BQ8WZ79 361 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 SEMA4DQ92854 862 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 BHMTQ93088 406 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 PLD4Q96BZ4 506 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 P2RY11Q96G91 374 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 CCDC34Q96HJ3 373 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 SLC2A11Q9BYW1 496 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 ZDHHC5Q9C0B5 715 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 PRDM16Q9HAZ2 1276 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 FSCN3Q9NQT6 498 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 CISHQ9NSE2 258 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 EVA1BQ9NVM1 165 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 RAB20Q9NX57 234 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 PLK2Q9NYY3 685 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 MARCH2Q9P0N8 246 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 USP36Q9P275 1121 aaKnown RBP7.98□□□□□ -1.13
NEK3-201ENST00000550331 THAP10Q9P2Z0 257 aaPredicted RBP7.98□□□□□ -1.13
NEK3-201ENST00000550331 AGO1Q9UL18 857 aaKnown RBP7.98□□□□□ -1.13
NEK3-201ENST00000550331 ATP6V1DQ9Y5K8 247 aa7.98□□□□□ -1.13
NEK3-201ENST00000550331 URB1O60287 2271 aaKnown RBP7.98□□□□□ -1.13
NEK3-201ENST00000550331 PCDH15Q96QU1 1955 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 BPTFQ12830 3046 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 WASH3PC4AMC7 463 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 XPO1O14980 1071 aaKnown RBP7.97□□□□□ -1.13
NEK3-201ENST00000550331 CETN3O15182 167 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 TIMM44O43615 452 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 SYNCRIPO60506 623 aaKnown RBP7.97□□□□□ -1.13
NEK3-201ENST00000550331 GJB3O75712 270 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 ZBED1O96006 694 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 EPB41P11171 864 aaKnown RBP7.97□□□□□ -1.13
NEK3-201ENST00000550331 CD59P13987 128 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 OXTRP30559 389 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 IL12RB1P42701 662 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 FAM193AP78312 1265 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 TRIP4Q15650 581 aaPredicted RBP7.97□□□□□ -1.13
NEK3-201ENST00000550331 ZNF423Q2M1K9 1284 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 PLEKHG6Q3KR16 790 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 PM20D1Q6GTS8 502 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 RAB44Q7Z6P3 723 aaPredicted RBP7.97□□□□□ -1.13
NEK3-201ENST00000550331 TMPRSS6Q8IU80 811 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 DENND1CQ8IV53 801 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 RGL4Q8IZJ4 473 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 RBBP8NLQ8NC74 664 aaPredicted RBP7.97□□□□□ -1.13
NEK3-201ENST00000550331 HNRNPLLQ8WVV9 542 aaKnown RBP7.97□□□□□ -1.13
NEK3-201ENST00000550331 PRCCQ92733 491 aaPredicted RBP7.97□□□□□ -1.13
NEK3-201ENST00000550331 TOE1Q96GM8 510 aaKnown RBP7.97□□□□□ -1.13
NEK3-201ENST00000550331 PIWIL1Q96J94 861 aaKnown RBP7.97□□□□□ -1.13
NEK3-201ENST00000550331 BBC3Q96PG8 261 aaPredicted RBP7.97□□□□□ -1.13
NEK3-201ENST00000550331 ARID3AQ99856 593 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 MKRN2Q9H000 416 aaKnown RBP7.97□□□□□ -1.13
NEK3-201ENST00000550331 SLC6A17Q9H1V8 727 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 CCDC86Q9H6F5 360 aaKnown RBP7.97□□□□□ -1.13
NEK3-201ENST00000550331 CD93Q9NPY3 652 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 ITM2CQ9NQX7 267 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 OLA1Q9NTK5 396 aaKnown RBP7.97□□□□□ -1.13
NEK3-201ENST00000550331 RMND1Q9NWS8 449 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 ELOVL2Q9NXB9 296 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 WSB2Q9NYS7 404 aaPredicted RBP7.97□□□□□ -1.13
NEK3-201ENST00000550331 ZDHHC9Q9Y397 364 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 COQ4Q9Y3A0 265 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 MYOFQ9NZM1 2061 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 MAST4O15021 2626 aa7.97□□□□□ -1.13
NEK3-201ENST00000550331 GOLGA4Q13439 2230 aaKnown RBP7.97□□□□□ -1.13
NEK3-201ENST00000550331 A0A1B0GTW7 788 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 SLC12A8A0AV02 714 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 MEI4A8MW99 385 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 SLC16A3O15427 465 aaKnown RBP7.96□□□□□ -1.14
NEK3-201ENST00000550331 ZNF202O95125 648 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 LATS1O95835 1130 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 HMBSP08397 361 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 SETSIPP0DME0 302 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 NCAM1P13591 858 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 HARS2P49590 506 aaKnown RBP7.96□□□□□ -1.14
NEK3-201ENST00000550331 TPMTP51580 245 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 TKTL1P51854 596 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 COPAP53621 1224 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 BCAT1P54687 386 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 YWHAEP62258 255 aaKnown RBP7.96□□□□□ -1.14
NEK3-201ENST00000550331 PDE4CQ08493 712 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 GRIK2Q13002 908 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 CUL2Q13617 745 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 ZNF234Q14588 700 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 GOLGA7BQ2TAP0 167 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 MPPE1Q53F39 396 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 COBLL1Q53SF7 1204 aa7.96□□□□□ -1.14
NEK3-201ENST00000550331 SERPINA13PQ6UXR4 307 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms