RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 CREB3L4Q8TEY5 395 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 ZNF483Q8TF39 744 aaPredicted RBP6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 HMGB4Q8WW32 186 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 KTI12Q96EK9 354 aaPredicted RBP6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 MCRS1Q96EZ8 462 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 CAPNS2Q96L46 248 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 HIST1H2AAQ96QV6 131 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 MECRQ9BV79 373 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 PTDSS2Q9BVG9 487 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 CCDC68Q9H2F9 335 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 KRT84Q9NSB2 600 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 CTTNBP2NLQ9P2B4 639 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 NDRG4Q9ULP0 352 aaKnown RBP6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 HSF4Q9ULV5 492 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 NFU1Q9UMS0 254 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 USP22Q9UPT9 525 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 CLCA2Q9UQC9 943 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 ANKRD36CQ5JPF3 1778 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 DUOX1Q9NRD9 1551 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 CENPFP49454 3210 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 CCDC195A0A1B0GUA6 201 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 KLK10O43240 276 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 URI1O94763 535 aaPredicted RBP6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 CSF1RP07333 972 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 HTR7P34969 479 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 PSMC2P35998 433 aaKnown RBP6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 MAP2K1Q02750 393 aaPredicted RBP6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 SF3A3Q12874 501 aaKnown RBP eCLIP6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 PDCLQ13371 301 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 ALDH1L2Q3SY69 923 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 ZNF484Q5JVG2 852 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 UBXN11Q5T124 520 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 H1FNTQ75WM6 255 aaPredicted RBP6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 ANKRD23Q86SG2 305 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 SYT12Q8IV01 421 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 KBTBD2Q8IY47 623 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 NGEFQ8N5V2 710 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 OR52N2Q8NGI0 321 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 ADAMTS17Q8TE56 1095 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 LCORQ96JN0 433 aaPredicted RBP6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 ZBTB45Q96K62 511 aaPredicted RBP6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 TIGD1Q96MW7 591 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 HSFX1Q9UBD0 423 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 IRAK3Q9Y616 596 aa6.76□□□□□ -1.33
TGFBR1-208ENST00000550253 MKI67P46013 3256 aaKnown RBP6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 LRRC37AA6NMS7 1700 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 DDX60Q8IY21 1712 aaKnown RBP6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 A0A1W2PRQ8 180 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 SAC3D1A6NKF1 404 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 PTP4A3O75365 173 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 LARGE1O95461 756 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 SPATA31D3P0C874 917 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 MGAT1P26572 445 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 ALDH1B1P30837 517 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 UQCRC1P31930 480 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 HOXD13P35453 343 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 KRT20P35900 424 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 NPTX2P47972 431 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 PGDP52209 483 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 GPR68Q15743 365 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 SUSD4Q5VX71 490 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 SPATA31D4Q6ZUB0 917 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 CARFQ8N187 725 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 PNKPQ96T60 521 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 IL21RQ9HBE5 538 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 LIN7CQ9NUP9 197 aaKnown RBP6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 TBC1D29Q9UFV1 150 aa6.75□□□□□ -1.33
TGFBR1-208ENST00000550253 NPC1L1Q9UHC9 1359 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 SLC38A8A6NNN8 435 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 H3BNC9 293 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 KIAA0355O15063 1070 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 SUN1O94901 812 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 SGPL1O95470 568 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 CPA1P15085 419 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 ALOX12P18054 663 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 GNAT2P19087 354 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 GLDCP23378 1020 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 GPTP24298 496 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 MAPK4P31152 587 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 GALNSP34059 522 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 PGM1P36871 562 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 GATMP50440 423 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 RAC3P60763 192 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 TIAL1Q01085 375 aaKnown RBP eCLIP6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 CCNIQ14094 377 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 METTL24Q5JXM2 366 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 SNX30Q5VWJ9 437 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 LRRC8DQ7L1W4 858 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 LRRC71Q8N4P6 559 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 TMEM171Q8WVE6 324 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 STAMQ92783 540 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 APOPT1Q96IL0 206 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 PAAF1Q9BRP4 392 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 FUZQ9BT04 418 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 GLIS2Q9BZE0 524 aaPredicted RBP6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 ZCWPW1Q9H0M4 648 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 RMI1Q9H9A7 625 aa6.74□□□□□ -1.33
TGFBR1-208ENST00000550253 MSL2Q9HCI7 577 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms