RNA–Protein interactions for RNA: ENST00000550064.5

CACNB3-213, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-213ENST00000550064 NUGGCQ68CJ6 796 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 TXNDC8Q6A555 127 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 RWDD4Q6NW29 188 aaKnown RBP12.51□□□□□ -0.41
CACNB3-213ENST00000550064 DARS2Q6PI48 645 aaKnown RBP12.51□□□□□ -0.41
CACNB3-213ENST00000550064 TMCO3Q6UWJ1 677 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 PRUNE1Q86TP1 453 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 UNC45BQ8IWX7 931 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 GSPT2Q8IYD1 628 aaKnown RBP12.51□□□□□ -0.41
CACNB3-213ENST00000550064 TDHQ8IZJ6 230 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 MRPS31Q92665 395 aaKnown RBP12.51□□□□□ -0.41
CACNB3-213ENST00000550064 TBC1D31Q96DN5 1066 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 BTN2A3PQ96KV6 586 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 SLC22A12Q96S37 553 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 CYP2S1Q96SQ9 504 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 TMEM121Q9BTD3 319 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 TLE6Q9H808 572 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 ASAH2Q9NR71 780 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 FAM114A2Q9NRY5 505 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 ARGLU1Q9NWB6 273 aaPredicted RBP12.51□□□□□ -0.41
CACNB3-213ENST00000550064 HCFC1R1Q9NWW0 138 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 DTLQ9NZJ0 730 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 NEU3Q9UQ49 428 aa12.51□□□□□ -0.41
CACNB3-213ENST00000550064 GOLGA6L7A0A1B0GV03 622 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 CCDC151A5D8V7 595 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 E9PAM4 449 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 SGK1O00141 431 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 RFXAPO00287 272 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 NRG2O14511 850 aaPredicted RBP12.5□□□□□ -0.41
CACNB3-213ENST00000550064 MFSD11O43934 449 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 ERLIN1O75477 346 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 OLFM2O95897 454 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 HNRNPA1P09651 372 aaKnown RBP eCLIP12.5□□□□□ -0.41
CACNB3-213ENST00000550064 GJA1P17302 382 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 HDCP19113 662 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 CDC25CP30307 473 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 HOXA9P31269 272 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 HOXC13P31276 330 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 RPL21P46778 160 aaKnown RBP12.5□□□□□ -0.41
CACNB3-213ENST00000550064 CLCN6P51797 869 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 EPHA5P54756 1037 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 XRCC4Q13426 336 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 CUL1Q13616 776 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 ZNF697Q5TEC3 545 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 RAP1GAP2Q684P5 730 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 NADSYN1Q6IA69 706 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 PDZD4Q76G19 769 aaPredicted RBP12.5□□□□□ -0.41
CACNB3-213ENST00000550064 ZNF683Q8IZ20 524 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 CCDC33Q8N5R6 958 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 ARL14EPQ8N8R7 260 aaPredicted RBP12.5□□□□□ -0.41
CACNB3-213ENST00000550064 GLIS1Q8NBF1 620 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 NETO2Q8NC67 525 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 LRRN4Q8WUT4 740 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 RSAD2Q8WXG1 361 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 WBP2Q969T9 261 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 PLD4Q96BZ4 506 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 OLFM3Q96PB7 478 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 PRMT1Q99873 361 aaKnown RBP12.5□□□□□ -0.41
CACNB3-213ENST00000550064 ATXN3LQ9H3M9 355 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 DNMT3BQ9UBC3 853 aaKnown RBP12.5□□□□□ -0.41
CACNB3-213ENST00000550064 VANGL2Q9ULK5 521 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 NFU1Q9UMS0 254 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 HCFC2Q9Y5Z7 792 aa12.5□□□□□ -0.41
CACNB3-213ENST00000550064 A0A1W2PRU2 124 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 BCLAF3A2AJT9 711 aaKnown RBP12.49□□□□□ -0.41
CACNB3-213ENST00000550064 FGF10O15520 208 aaPredicted RBP12.49□□□□□ -0.41
CACNB3-213ENST00000550064 ACSL4O60488 711 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 STC2O76061 302 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 KLKB1P03952 638 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 ZSCAN5DPP0CG00 497 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 IRF1P10914 325 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 TACR2P21452 398 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 IVDP26440 423 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 CCR2P41597 374 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 NRIP1P48552 1158 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 HARS2P49590 506 aaKnown RBP12.49□□□□□ -0.41
CACNB3-213ENST00000550064 VPS41P49754 854 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 GDF10P55107 478 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 RBM10P98175 930 aaKnown RBP12.49□□□□□ -0.41
CACNB3-213ENST00000550064 MTA1Q13330 715 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 DUSP6Q16828 381 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 ACBD5Q5T8D3 534 aaPredicted RBP12.49□□□□□ -0.41
CACNB3-213ENST00000550064 LRRC31Q6UY01 552 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 BZW1Q7L1Q6 419 aaKnown RBP12.49□□□□□ -0.41
CACNB3-213ENST00000550064 DENND1CQ8IV53 801 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 CDKL3Q8IVW4 592 aaPredicted RBP12.49□□□□□ -0.41
CACNB3-213ENST00000550064 TP53INP2Q8IXH6 220 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 NPWQ8N729 165 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 MAB21L3Q8N8X9 362 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 FAM71DQ8N9W8 422 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 SHKBP1Q8TBC3 707 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 HNRNPLLQ8WVV9 542 aaKnown RBP12.49□□□□□ -0.41
CACNB3-213ENST00000550064 IGSF8Q969P0 613 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 AZIN2Q96A70 460 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 TIFAQ96CG3 184 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 TCEAL4Q96EI5 215 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 ZFRQ96KR1 1074 aaKnown RBP12.49□□□□□ -0.41
CACNB3-213ENST00000550064 QKIQ96PU8 341 aaKnown RBP eCLIP12.49□□□□□ -0.41
CACNB3-213ENST00000550064 GCNAQ96QF7 691 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 PRKD2Q9BZL6 878 aa12.49□□□□□ -0.41
CACNB3-213ENST00000550064 KLC2Q9H0B6 622 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms