RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 FAM136AQ96C01 138 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 PEBP4Q96S96 227 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 C20orf27Q9GZN8 174 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 GDAP2Q9NXN4 497 aa11.43□□□□□ -0.58
LINC00661-204ENST00000549354 TRIP11Q15643 1979 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 PRR5-ARHGAP8B1AHC4 643 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 I3L4J1 428 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 DNAJC6O75061 913 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 MICAL2O94851 1124 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 CD4P01730 458 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 FAM163BP0C2L3 166 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 C6orf222P0C671 652 aaPredicted RBP11.42□□□□□ -0.58
LINC00661-204ENST00000549354 AKAP5P24588 427 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 NDST1P52848 882 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 ARHGAP8P85298 464 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 PDE1BQ01064 536 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 CAP1Q01518 475 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 ROR1Q01973 937 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 GBE1Q04446 702 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 CACNB2Q08289 660 aaPredicted RBP11.42□□□□□ -0.58
LINC00661-204ENST00000549354 MGAT3Q09327 533 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 DPYSL3Q14195 570 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 PIGHQ14442 188 aaPredicted RBP11.42□□□□□ -0.58
LINC00661-204ENST00000549354 PKDCCQ504Y2 493 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 TCHHL1Q5QJ38 904 aaPredicted RBP11.42□□□□□ -0.58
LINC00661-204ENST00000549354 FOXB2Q5VYV0 432 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 CES4AQ5XG92 561 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 UNC93AQ86WB7 457 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 NUDCD3Q8IVD9 361 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 NAT8LQ8N9F0 302 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 RNF169Q8NCN4 708 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 GSTCDQ8NEC7 633 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 MCRS1Q96EZ8 462 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 MARK4Q96L34 752 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 LGMNQ99538 433 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 VCXQ9H320 206 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 SMIM28A0A1B0GU29 152 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 ATP9BO43861 1147 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 ITGAVP06756 1048 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 TPH1P17752 444 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 ACAT1P24752 427 aaKnown RBP11.42□□□□□ -0.58
LINC00661-204ENST00000549354 PTPN7P35236 360 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 RIPOR1Q6ZS17 1223 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 PTAR1Q7Z6K3 402 aaPredicted RBP11.42□□□□□ -0.58
LINC00661-204ENST00000549354 TDRPQ86YL5 185 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 SLC35B2Q8TB61 432 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 SH3TC2Q8TF17 1288 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 PTCD3Q96EY7 689 aaKnown RBP11.42□□□□□ -0.58
LINC00661-204ENST00000549354 NT5C1AQ9BXI3 368 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 TRIM4Q9C037 500 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 CHST12Q9NRB3 414 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 KRT82Q9NSB4 513 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 TUBGCP4Q9UGJ1 667 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 PIN4Q9Y237 131 aaKnown RBP11.42□□□□□ -0.58
LINC00661-204ENST00000549354 TIMM13Q9Y5L4 95 aaPredicted RBP11.42□□□□□ -0.58
LINC00661-204ENST00000549354 TRPV2Q9Y5S1 764 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 hCG_2014768A0A024R1R8 64 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 IQANK1A0A1B0GTG1 560 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 MLH1P40692 756 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 GLRBP48167 497 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 PRKCZQ05513 592 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 AP1B1Q10567 949 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 KLHL38Q2WGJ6 581 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 PAN2Q504Q3 1202 aaKnown RBP11.42□□□□□ -0.58
LINC00661-204ENST00000549354 GDF6Q6KF10 455 aaPredicted RBP11.42□□□□□ -0.58
LINC00661-204ENST00000549354 XYLT1Q86Y38 959 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 ENDOVQ8N8Q3 282 aaKnown RBP11.42□□□□□ -0.58
LINC00661-204ENST00000549354 KHSRPQ92945 711 aaKnown RBP eCLIP11.42□□□□□ -0.58
LINC00661-204ENST00000549354 SGF29Q96ES7 293 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 GBP5Q96PP8 586 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 SH3GL3Q99963 347 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 SENP6Q9GZR1 1112 aaPredicted RBP11.42□□□□□ -0.58
LINC00661-204ENST00000549354 SPC25Q9HBM1 224 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 PPM1HQ9ULR3 514 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 FARP1Q9Y4F1 1045 aaPredicted RBP11.42□□□□□ -0.58
LINC00661-204ENST00000549354 IPPQ9Y573 584 aa11.42□□□□□ -0.58
LINC00661-204ENST00000549354 RARBP10826 455 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 CCNG1P51959 295 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 RELL1Q8IUW5 271 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 USP33Q8TEY7 942 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 C18orf25Q96B23 403 aaPredicted RBP11.41□□□□□ -0.58
LINC00661-204ENST00000549354 XPOTO43592 962 aaKnown RBP11.41□□□□□ -0.58
LINC00661-204ENST00000549354 OPHN1O60890 802 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 PFKMP08237 780 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 CD1EP15812 388 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 ACADSP16219 412 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 LRPAP1P30533 357 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 SERPINB6P35237 376 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 SCN1AP35498 2009 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 PNPLA4P41247 253 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 RALGPS1Q5JS13 557 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 MAP3K21Q5TCX8 1036 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 ARHGAP17Q68EM7 881 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 CMC1Q7Z7K0 106 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 SLC26A7Q8TE54 656 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 FAM172AQ8WUF8 416 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 RNF39Q9H2S5 420 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 LRCH1Q9Y2L9 728 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 NME7Q9Y5B8 376 aa11.41□□□□□ -0.58
LINC00661-204ENST00000549354 CXCR3P49682 368 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms