RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 PLA2G4AP47712 749 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 PSEN1P49768 467 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 KIF11P52732 1056 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 UCNP55089 124 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 TMPRSS3P57727 454 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 ISM2Q6H9L7 571 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 Q6ZNB5 142 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 GPRIN1Q7Z2K8 1008 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 CCDC186Q7Z3E2 898 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 FAM124AQ86V42 546 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 GATAD2AQ86YP4 633 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 SNRNP27Q8WVK2 155 aaKnown RBP12.76□□□□□ -0.37
DDX54-206ENST00000549271 BIRC7Q96CA5 298 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 CYFIP2Q96F07 1278 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 TWNKQ96RR1 684 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 LGMNQ99538 433 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 ORAI3Q9BRQ5 295 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 NT5C1AQ9BXI3 368 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 NMUR1Q9HB89 426 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 CPNE5Q9HCH3 593 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 FAM49BQ9NUQ9 324 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.76□□□□□ -0.378e-9■■■■■ 33.2
DDX54-206ENST00000549271 CLIC5Q9NZA1 410 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 CHMP5Q9NZZ3 219 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 HOOK1Q9UJC3 728 aaKnown RBP12.76□□□□□ -0.37
DDX54-206ENST00000549271 USP3Q9Y6I4 520 aa12.76□□□□□ -0.37
DDX54-206ENST00000549271 TRIM49BA6NDI0 452 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 CETN3O15182 167 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 CYP26A1O43174 497 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 SYNCRIPO60506 623 aaKnown RBP12.75□□□□□ -0.37
DDX54-206ENST00000549271 TSPAN3O60637 253 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 CLSTN1O94985 981 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 RARGP13631 454 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 CD27P26842 260 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 GTF2H1P32780 548 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 PIK3CAP42336 1068 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 SHBQ15464 509 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 GEN1Q17RS7 908 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 ARHGAP40Q5TG30 622 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 TADA2BQ86TJ2 420 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 CACUL1Q86Y37 369 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 RBBP8NLQ8NC74 664 aaPredicted RBP12.75□□□□□ -0.37
DDX54-206ENST00000549271 ZNF248Q8NDW4 579 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 RFFLQ8WZ73 363 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 SEMA4DQ92854 862 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 MED8Q96G25 268 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 HIC2Q96JB3 615 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 ARID3AQ99856 593 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 GTPBP4Q9BZE4 634 aaKnown RBP12.75□□□□□ -0.37
DDX54-206ENST00000549271 IMPG2Q9BZV3 1241 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 DNAI2Q9GZS0 605 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 NIF3L1Q9GZT8 377 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 TMEM8AQ9HCN3 771 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 ZNF510Q9Y2H8 683 aa12.75□□□□□ -0.37
DDX54-206ENST00000549271 A0A1W2PQH9 124 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 PPP1R3GB7ZBB8 358 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 VILLO15195 856 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 PENKP01210 267 aaPredicted RBP12.74□□□□□ -0.37
DDX54-206ENST00000549271 NTRK1P04629 796 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 EPB41P11171 864 aaKnown RBP12.74□□□□□ -0.37
DDX54-206ENST00000549271 PRKCHP24723 683 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 ADORA2BP29275 332 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 MFAP3P55082 362 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 FKBP3Q00688 224 aaKnown RBP12.74□□□□□ -0.37
DDX54-206ENST00000549271 ILKQ13418 452 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 MORC3Q14149 939 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 ZNF234Q14588 700 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 BROXQ5VW32 411 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 KRT39Q6A163 491 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 SCD5Q86SK9 330 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 TTC39CQ8N584 583 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 DCBLD1Q8N8Z6 715 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 SAP25Q8TEE9 199 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 BHMTQ93088 406 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 DHTKD1Q96HY7 919 aaPredicted RBP12.74□□□□□ -0.37
DDX54-206ENST00000549271 CDK5RAP1Q96SZ6 601 aaKnown RBP12.74□□□□□ -0.37
DDX54-206ENST00000549271 ELF4Q99607 663 aaPredicted RBP12.74□□□□□ -0.37
DDX54-206ENST00000549271 DUSP16Q9BY84 665 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 UBXN6Q9BZV1 441 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 MMRN2Q9H8L6 949 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 IGSF5Q9NSI5 407 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 PLK2Q9NYY3 685 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 IL17BQ9UHF5 180 aa12.74□□□□□ -0.37
DDX54-206ENST00000549271 BSNQ9UPA5 3926 aa12.73□□□□□ -0.37
DDX54-206ENST00000549271 SLC16A3O15427 465 aaKnown RBP12.73□□□□□ -0.37
DDX54-206ENST00000549271 STC2O76061 302 aa12.73□□□□□ -0.37
DDX54-206ENST00000549271 SEMA4FO95754 770 aa12.73□□□□□ -0.37
DDX54-206ENST00000549271 GLDCP23378 1020 aa12.73□□□□□ -0.37
DDX54-206ENST00000549271 PCBP4P57723 403 aaKnown RBP12.73□□□□□ -0.37
DDX54-206ENST00000549271 COG7P83436 770 aa12.73□□□□□ -0.37
DDX54-206ENST00000549271 LRRC63Q05C16 580 aa12.73□□□□□ -0.37
DDX54-206ENST00000549271 COLEC12Q5KU26 742 aa12.73□□□□□ -0.37
DDX54-206ENST00000549271 C10orf120Q5SQS8 335 aa12.73□□□□□ -0.37
DDX54-206ENST00000549271 UCMAQ8WVF2 138 aa12.73□□□□□ -0.37
DDX54-206ENST00000549271 NAF1Q96HR8 494 aaKnown RBP12.73□□□□□ -0.37
DDX54-206ENST00000549271 TSG101Q99816 390 aa12.73□□□□□ -0.37
DDX54-206ENST00000549271 DCLK3Q9C098 648 aa12.73□□□□□ -0.37
DDX54-206ENST00000549271 LHX5Q9H2C1 402 aa12.73□□□□□ -0.37
DDX54-206ENST00000549271 CLCA2Q9UQC9 943 aa12.73□□□□□ -0.37
DDX54-206ENST00000549271 BIN1O00499 593 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms