RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 CD19P15391 556 aa17.14■□□□□ 0.33
SSH1-208ENST00000548522 RPL13P26373 211 aaKnown RBP17.14■□□□□ 0.33
SSH1-208ENST00000548522 CD27P26842 260 aa17.14■□□□□ 0.33
SSH1-208ENST00000548522 CTSKP43235 329 aa17.14■□□□□ 0.33
SSH1-208ENST00000548522 CCT8P50990 548 aa17.14■□□□□ 0.33
SSH1-208ENST00000548522 SLC8A3P57103 927 aa17.14■□□□□ 0.33
SSH1-208ENST00000548522 BST2Q10589 180 aaKnown RBP17.14■□□□□ 0.33
SSH1-208ENST00000548522 CUL2Q13617 745 aa17.14■□□□□ 0.33
SSH1-208ENST00000548522 TEAD4Q15561 434 aa17.14■□□□□ 0.33
SSH1-208ENST00000548522 FAM133BQ5BKY9 247 aaKnown RBP17.14■□□□□ 0.33
SSH1-208ENST00000548522 PRAMEF14Q5SWL7 426 aa17.14■□□□□ 0.33
SSH1-208ENST00000548522 ADGRF1Q5T601 910 aa17.14■□□□□ 0.33
SSH1-208ENST00000548522 DHRS13Q6UX07 377 aa17.14■□□□□ 0.33
SSH1-208ENST00000548522 AHI1Q8N157 1196 aa17.14■□□□□ 0.33
SSH1-208ENST00000548522 IGSF8Q969P0 613 aa17.14■□□□□ 0.33
SSH1-208ENST00000548522 MYO19Q96H55 970 aa17.14■□□□□ 0.33
SSH1-208ENST00000548522 PRICKLE1Q96MT3 831 aaPredicted RBP17.14■□□□□ 0.33
SSH1-208ENST00000548522 SLC6A18Q96N87 628 aa17.14■□□□□ 0.33
SSH1-208ENST00000548522 OLA1Q9NTK5 396 aaKnown RBP17.14■□□□□ 0.33
SSH1-208ENST00000548522 FAM237AA0A1B0GTK4 181 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 FAM47DPA6NHR8 397 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 CBX4O00257 560 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 O00370 1275 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 TBL1XO60907 577 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 CALCAP01258 141 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 DNTTP04053 509 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 LCP1P13796 627 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 GRK6P43250 576 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 RGS7P49802 495 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 DAOAP59103 153 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 E2F5Q15329 346 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 SGO2Q562F6 1265 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 DCAF17Q5H9S7 520 aaPredicted RBP17.13■□□□□ 0.33
SSH1-208ENST00000548522 KRBA2Q6ZNG9 492 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 GATAD2AQ86YP4 633 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 SIX6OS1Q8N1H7 587 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 TTC39CQ8N584 583 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 CLEC4CQ8WTT0 213 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 FAXDC2Q96IV6 333 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 LMLNQ96KR4 655 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 SPATA32Q96LK8 384 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 EBF2Q9HAK2 575 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 OSGEPQ9NPF4 335 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 DKK4Q9UBT3 224 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 KALRNO60229 2985 aa17.13■□□□□ 0.33
SSH1-208ENST00000548522 TNFSF14O43557 240 aa17.12■□□□□ 0.33
SSH1-208ENST00000548522 PCDHGA12O60330 932 aa17.12■□□□□ 0.33
SSH1-208ENST00000548522 SIN3BO75182 1162 aa17.12■□□□□ 0.33
SSH1-208ENST00000548522 IGLV3-27P01718 113 aa17.12■□□□□ 0.33
SSH1-208ENST00000548522 EPB41P11171 864 aaKnown RBP17.12■□□□□ 0.33
SSH1-208ENST00000548522 LRMPQ12912 555 aa17.12■□□□□ 0.33
SSH1-208ENST00000548522 SUZ12Q15022 739 aaKnown RBP17.12■□□□□ 0.33
SSH1-208ENST00000548522 SMAD1Q15797 465 aaKnown RBP17.12■□□□□ 0.33
SSH1-208ENST00000548522 EDRF1Q3B7T1 1238 aa17.12■□□□□ 0.33
SSH1-208ENST00000548522 TTC31Q49AM3 519 aaPredicted RBP17.12■□□□□ 0.33
SSH1-208ENST00000548522 PKDCCQ504Y2 493 aa17.12■□□□□ 0.33
SSH1-208ENST00000548522 PIK3R6Q5UE93 754 aa17.12■□□□□ 0.33
SSH1-208ENST00000548522 TCERG1LQ5VWI1 586 aa17.12■□□□□ 0.33
SSH1-208ENST00000548522 ZNF776Q68DI1 518 aaPredicted RBP17.12■□□□□ 0.33
SSH1-208ENST00000548522 NADSYN1Q6IA69 706 aa17.12■□□□□ 0.33
SSH1-208ENST00000548522 MMS22LQ6ZRQ5 1243 aa17.12■□□□□ 0.33
SSH1-208ENST00000548522 UBR7Q8N806 425 aa17.12■□□□□ 0.33
SSH1-208ENST00000548522 TFAP2BQ92481 460 aa17.12■□□□□ 0.33
SSH1-208ENST00000548522 CCDC47Q96A33 483 aaKnown RBP17.12■□□□□ 0.33
SSH1-208ENST00000548522 ZSWIM1Q9BR11 485 aa17.12■□□□□ 0.33
SSH1-208ENST00000548522 RSPH9Q9H1X1 276 aaPredicted RBP17.12■□□□□ 0.33
SSH1-208ENST00000548522 SCUBE2Q9NQ36 999 aa17.12■□□□□ 0.33
SSH1-208ENST00000548522 STIM2Q9P246 746 aa17.12■□□□□ 0.33
SSH1-208ENST00000548522 INTS6Q9UL03 887 aaKnown RBP17.12■□□□□ 0.33
SSH1-208ENST00000548522 ZDHHC9Q9Y397 364 aa17.12■□□□□ 0.33
SSH1-208ENST00000548522 GOLGA4Q13439 2230 aaKnown RBP17.12■□□□□ 0.33
SSH1-208ENST00000548522 SETXQ7Z333 2677 aaKnown RBP17.12■□□□□ 0.33
SSH1-208ENST00000548522 URB1O60287 2271 aaKnown RBP17.11■□□□□ 0.33
SSH1-208ENST00000548522 WNT9AO14904 365 aa17.11■□□□□ 0.33
SSH1-208ENST00000548522 LATS1O95835 1130 aa17.11■□□□□ 0.33
SSH1-208ENST00000548522 WNT1P04628 370 aa17.11■□□□□ 0.33
SSH1-208ENST00000548522 POLR2EP19388 210 aaKnown RBP17.11■□□□□ 0.33
SSH1-208ENST00000548522 ZNF445P59923 1031 aa17.11■□□□□ 0.33
SSH1-208ENST00000548522 ZBTB16Q05516 673 aa17.11■□□□□ 0.33
SSH1-208ENST00000548522 KIAA0895LQ68EN5 471 aa17.11■□□□□ 0.33
SSH1-208ENST00000548522 MSANTD2Q6P1R3 559 aa17.11■□□□□ 0.33
SSH1-208ENST00000548522 ADAT2Q7Z6V5 191 aaKnown RBP17.11■□□□□ 0.33
SSH1-208ENST00000548522 MFN1Q8IWA4 741 aa17.11■□□□□ 0.33
SSH1-208ENST00000548522 DHX40Q8IX18 779 aaKnown RBP17.11■□□□□ 0.33
SSH1-208ENST00000548522 MRGPRX3Q96LB0 322 aa17.11■□□□□ 0.33
SSH1-208ENST00000548522 PABPC3Q9H361 631 aaKnown RBP17.11■□□□□ 0.33
SSH1-208ENST00000548522 FBRSQ9HAH7 460 aa17.11■□□□□ 0.33
SSH1-208ENST00000548522 SGK2Q9HBY8 427 aa17.11■□□□□ 0.33
SSH1-208ENST00000548522 ABCC13Q9NSE7 274 aa17.11■□□□□ 0.33
SSH1-208ENST00000548522 HESX1Q9UBX0 185 aa17.11■□□□□ 0.33
SSH1-208ENST00000548522 HELZ2Q9BYK8 2649 aaKnown RBP17.1■□□□□ 0.33
SSH1-208ENST00000548522 A0A1W2PP55 124 aa17.1■□□□□ 0.33
SSH1-208ENST00000548522 MID1O15344 667 aa17.1■□□□□ 0.33
SSH1-208ENST00000548522 ATP5BP06576 529 aaKnown RBP17.1■□□□□ 0.33
SSH1-208ENST00000548522 SETSIPP0DME0 302 aa17.1■□□□□ 0.33
SSH1-208ENST00000548522 CSKP41240 450 aa17.1■□□□□ 0.33
SSH1-208ENST00000548522 CTSOP43234 321 aaPredicted RBP17.1■□□□□ 0.33
SSH1-208ENST00000548522 NUMBP49757 651 aa17.1■□□□□ 0.33
SSH1-208ENST00000548522 PMS1P54277 932 aaKnown RBP17.1■□□□□ 0.33
SSH1-208ENST00000548522 RPS24P62847 133 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms