RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 FOSL2P15408 326 aa29.72■■■□□ 2.35
BRF1-213ENST00000548421 KLF1Q13351 362 aaPredicted RBP29.72■■■□□ 2.35
BRF1-213ENST00000548421 AUHQ13825 339 aaKnown RBP29.72■■■□□ 2.35
BRF1-213ENST00000548421 TFDP2Q14188 446 aa29.72■■■□□ 2.35
BRF1-213ENST00000548421 Q6ZNB5 142 aa29.72■■■□□ 2.35
BRF1-213ENST00000548421 HTR3DQ70Z44 454 aa29.72■■■□□ 2.35
BRF1-213ENST00000548421 CHSY1Q86X52 802 aa29.72■■■□□ 2.35
BRF1-213ENST00000548421 ARID3BQ8IVW6 561 aaPredicted RBP29.72■■■□□ 2.35
BRF1-213ENST00000548421 PCDH19Q8TAB3 1148 aa29.72■■■□□ 2.35
BRF1-213ENST00000548421 MAIP1Q8WWC4 291 aa29.72■■■□□ 2.35
BRF1-213ENST00000548421 GUCD1Q96NT3 240 aa29.72■■■□□ 2.35
BRF1-213ENST00000548421 STOML2Q9UJZ1 356 aa29.72■■■□□ 2.35
BRF1-213ENST00000548421 ZNF510Q9Y2H8 683 aa29.72■■■□□ 2.35
BRF1-213ENST00000548421 DOCK4Q8N1I0 1966 aa29.72■■■□□ 2.35
BRF1-213ENST00000548421 EYSQ5T1H1 3165 aa29.71■■■□□ 2.35
BRF1-213ENST00000548421 E9PAM4 449 aa29.71■■■□□ 2.35
BRF1-213ENST00000548421 DAPK3O43293 454 aa29.71■■■□□ 2.35
BRF1-213ENST00000548421 TCF3P15923 654 aa29.71■■■□□ 2.35
BRF1-213ENST00000548421 DPYSQ14117 519 aa29.71■■■□□ 2.35
BRF1-213ENST00000548421 FAM133BQ5BKY9 247 aaKnown RBP29.71■■■□□ 2.35
BRF1-213ENST00000548421 LRRC31Q6UY01 552 aa29.71■■■□□ 2.35
BRF1-213ENST00000548421 TTC16Q8NEE8 873 aa29.71■■■□□ 2.35
BRF1-213ENST00000548421 TBC1D31Q96DN5 1066 aa29.71■■■□□ 2.35
BRF1-213ENST00000548421 DDX50Q9BQ39 737 aaKnown RBP29.71■■■□□ 2.35
BRF1-213ENST00000548421 KIF9Q9HAQ2 790 aa29.71■■■□□ 2.35
BRF1-213ENST00000548421 PRDM16Q9HAZ2 1276 aa29.71■■■□□ 2.35
BRF1-213ENST00000548421 ARHGEF4Q9NR80 690 aa29.71■■■□□ 2.35
BRF1-213ENST00000548421 CD207Q9UJ71 328 aa29.71■■■□□ 2.35
BRF1-213ENST00000548421 VANGL2Q9ULK5 521 aa29.71■■■□□ 2.35
BRF1-213ENST00000548421 DOCK8Q8NF50 2099 aa29.71■■■□□ 2.35
BRF1-213ENST00000548421 C5orf42Q9H799 3197 aa29.7■■■□□ 2.35
BRF1-213ENST00000548421 TCRBV7S2A1N4TA0A589 114 aa29.7■■■□□ 2.35
BRF1-213ENST00000548421 CST8O60676 142 aa29.7■■■□□ 2.35
BRF1-213ENST00000548421 TACR2P21452 398 aa29.7■■■□□ 2.35
BRF1-213ENST00000548421 HOXC13P31276 330 aa29.7■■■□□ 2.35
BRF1-213ENST00000548421 ADCY2Q08462 1091 aa29.7■■■□□ 2.35
BRF1-213ENST00000548421 ADGRF1Q5T601 910 aa29.7■■■□□ 2.35
BRF1-213ENST00000548421 BBS12Q6ZW61 710 aa29.7■■■□□ 2.35
BRF1-213ENST00000548421 ZNF572Q7Z3I7 529 aaPredicted RBP29.7■■■□□ 2.35
BRF1-213ENST00000548421 ADAT2Q7Z6V5 191 aaKnown RBP29.7■■■□□ 2.35
BRF1-213ENST00000548421 C14orf80Q86SX3 495 aa29.7■■■□□ 2.35
BRF1-213ENST00000548421 NECTIN4Q96NY8 510 aa29.7■■■□□ 2.35
BRF1-213ENST00000548421 STIM2Q9P246 746 aa29.7■■■□□ 2.35
BRF1-213ENST00000548421 NEU3Q9UQ49 428 aa29.7■■■□□ 2.35
BRF1-213ENST00000548421 GOLGA6L7A0A1B0GV03 622 aa29.69■■■□□ 2.34
BRF1-213ENST00000548421 E2F8A0AVK6 867 aa29.69■■■□□ 2.34
BRF1-213ENST00000548421 F5H5T6 163 aa29.69■■■□□ 2.34
BRF1-213ENST00000548421 EPHB2P29323 1055 aa29.69■■■□□ 2.34
BRF1-213ENST00000548421 SLC9A4Q6AI14 798 aa29.69■■■□□ 2.34
BRF1-213ENST00000548421 RWDD4Q6NW29 188 aaKnown RBP29.69■■■□□ 2.34
BRF1-213ENST00000548421 ZNF683Q8IZ20 524 aa29.69■■■□□ 2.34
BRF1-213ENST00000548421 PQLC3Q8N755 202 aa29.69■■■□□ 2.34
BRF1-213ENST00000548421 CEP112Q8N8E3 955 aa29.69■■■□□ 2.34
BRF1-213ENST00000548421 CDH7Q9ULB5 785 aa29.69■■■□□ 2.34
BRF1-213ENST00000548421 SPTBN5Q9NRC6 3674 aaKnown RBP29.69■■■□□ 2.34
BRF1-213ENST00000548421 APOL1O14791 398 aa29.68■■■□□ 2.34
BRF1-213ENST00000548421 ZFXP17010 805 aaPredicted RBP29.68■■■□□ 2.34
BRF1-213ENST00000548421 AMPD1P23109 780 aa29.68■■■□□ 2.34
BRF1-213ENST00000548421 DYNLT1P63172 113 aa29.68■■■□□ 2.34
BRF1-213ENST00000548421 USP4Q13107 963 aa29.68■■■□□ 2.34
BRF1-213ENST00000548421 CCDC85BQ15834 202 aaPredicted RBP29.68■■■□□ 2.34
BRF1-213ENST00000548421 ZNF77Q15935 545 aa29.68■■■□□ 2.34
BRF1-213ENST00000548421 ARTNQ5T4W7 220 aa29.68■■■□□ 2.34
BRF1-213ENST00000548421 FBXL22Q6P050 247 aa29.68■■■□□ 2.34
BRF1-213ENST00000548421 CELF5Q8N6W0 485 aaKnown RBP29.68■■■□□ 2.34
BRF1-213ENST00000548421 MNS1Q8NEH6 495 aa29.68■■■□□ 2.34
BRF1-213ENST00000548421 SMARCD2Q92925 531 aa29.68■■■□□ 2.34
BRF1-213ENST00000548421 ASB16Q96NS5 453 aa29.68■■■□□ 2.34
BRF1-213ENST00000548421 PPARGC1AQ9UBK2 798 aaKnown RBP29.68■■■□□ 2.34
BRF1-213ENST00000548421 IGLV3-10A0A075B6K4 115 aa29.68■■■□□ 2.34
BRF1-213ENST00000548421 KRIT1O00522 736 aa29.68■■■□□ 2.34
BRF1-213ENST00000548421 FGF10O15520 208 aaPredicted RBP29.68■■■□□ 2.34
BRF1-213ENST00000548421 SLC6A4P31645 630 aa29.68■■■□□ 2.34
BRF1-213ENST00000548421 FAM78AQ5JUQ0 283 aa29.68■■■□□ 2.34
BRF1-213ENST00000548421 AP1M1Q9BXS5 423 aa29.68■■■□□ 2.34
BRF1-213ENST00000548421 POMKQ9H5K3 350 aa29.68■■■□□ 2.34
BRF1-213ENST00000548421 CATSPERBQ9H7T0 1116 aa29.68■■■□□ 2.34
BRF1-213ENST00000548421 GOLGA6L10A0A0M3HER8 536 aa29.67■■■□□ 2.34
BRF1-213ENST00000548421 SCAMP3O14828 347 aaKnown RBP29.67■■■□□ 2.34
BRF1-213ENST00000548421 ERCC2P18074 760 aa29.67■■■□□ 2.34
BRF1-213ENST00000548421 SIX1Q15475 284 aaPredicted RBP29.67■■■□□ 2.34
BRF1-213ENST00000548421 FAM217AQ8IXS0 508 aa29.67■■■□□ 2.34
BRF1-213ENST00000548421 ZDHHC14Q8IZN3 488 aa29.67■■■□□ 2.34
BRF1-213ENST00000548421 LGI2Q8N0V4 545 aa29.67■■■□□ 2.34
BRF1-213ENST00000548421 RPRD1AQ96P16 312 aaPredicted RBP29.67■■■□□ 2.34
BRF1-213ENST00000548421 CARD6Q9BX69 1037 aa29.67■■■□□ 2.34
BRF1-213ENST00000548421 ZYG11BQ9C0D3 744 aa29.67■■■□□ 2.34
BRF1-213ENST00000548421 UBE2ZQ9H832 354 aaPredicted RBP29.67■■■□□ 2.34
BRF1-213ENST00000548421 H3BQ06 376 aaPredicted RBP29.66■■■□□ 2.34
BRF1-213ENST00000548421 DCLK1O15075 740 aa29.66■■■□□ 2.34
BRF1-213ENST00000548421 TGM2P21980 687 aa29.66■■■□□ 2.34
BRF1-213ENST00000548421 SKIV2LQ15477 1246 aaKnown RBP29.66■■■□□ 2.34
BRF1-213ENST00000548421 C5orf22Q49AR2 442 aa29.66■■■□□ 2.34
BRF1-213ENST00000548421 RFWD3Q6PCD5 774 aa29.66■■■□□ 2.34
BRF1-213ENST00000548421 BBS7Q8IWZ6 715 aa29.66■■■□□ 2.34
BRF1-213ENST00000548421 PLD5Q8N7P1 536 aa29.66■■■□□ 2.34
BRF1-213ENST00000548421 SPATA4Q8NEY3 305 aa29.66■■■□□ 2.34
BRF1-213ENST00000548421 RIN3Q8TB24 985 aa29.66■■■□□ 2.34
BRF1-213ENST00000548421 SUSD6Q92537 303 aa29.66■■■□□ 2.34
BRF1-213ENST00000548421 RPGRIP1Q96KN7 1286 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms