RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 THAP12O43422 761 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 MED7O43513 233 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 GJB3O75712 270 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 DLDP09622 509 aaKnown RBP13.85□□□□□ -0.19
CPSF6-204ENST00000547486 ACADMP11310 421 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 CD59P13987 128 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 USP8P40818 1118 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 ACADSBP45954 432 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 FAM193AP78312 1265 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 E2F5Q15329 346 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 ST3GAL2Q16842 350 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 ARHGAP44Q17R89 818 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 ZC3H12AQ5D1E8 599 aaKnown RBP13.85□□□□□ -0.19
CPSF6-204ENST00000547486 MS4A13Q5J8X5 152 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 WDR45BQ5MNZ6 344 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 DCAF12L1Q5VU92 463 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 MMS22LQ6ZRQ5 1243 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 BEND5Q7L4P6 421 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 TTC17Q96AE7 1141 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 MYO19Q96H55 970 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 IRX2Q9BZI1 471 aaPredicted RBP13.85□□□□□ -0.19
CPSF6-204ENST00000547486 DNAAF2Q9NVR5 837 aaKnown RBP13.85□□□□□ -0.19
CPSF6-204ENST00000547486 SLCO1B1Q9Y6L6 691 aa13.85□□□□□ -0.19
CPSF6-204ENST00000547486 FRYQ5TBA9 3013 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 MEI4A8MW99 385 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 SART1O43290 800 aaKnown RBP13.84□□□□□ -0.19
CPSF6-204ENST00000547486 OPHN1O60890 802 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 MOCS2O96007 188 aaPredicted RBP13.84□□□□□ -0.19
CPSF6-204ENST00000547486 IGLV3-25P01717 112 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 SYPP08247 313 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 GNSP15586 552 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 POLR2EP19388 210 aaKnown RBP13.84□□□□□ -0.19
CPSF6-204ENST00000547486 PON1P27169 355 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 GNA15P30679 374 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 ACSL1P33121 698 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 RPS14P62263 151 aaKnown RBP13.84□□□□□ -0.19
CPSF6-204ENST00000547486 YWHAZP63104 245 aaKnown RBP13.84□□□□□ -0.19
CPSF6-204ENST00000547486 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
CPSF6-204ENST00000547486 EIF4EBP2Q13542 120 aaPredicted RBP13.84□□□□□ -0.19
CPSF6-204ENST00000547486 MEA1Q16626 185 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 DCAF6Q58WW2 860 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 GBP6Q6ZN66 633 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 ENOSF1Q7L5Y1 443 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 MFN1Q8IWA4 741 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 HDDC3Q8N4P3 179 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 ZCCHC9Q8N567 271 aaKnown RBP13.84□□□□□ -0.19
CPSF6-204ENST00000547486 HJURPQ8NCD3 748 aaPredicted RBP13.84□□□□□ -0.19
CPSF6-204ENST00000547486 C1orf216Q8TAB5 229 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 SHC3Q92529 594 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 MRGPRX3Q96LB0 322 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 CAMK1GQ96NX5 476 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 SERPINB11Q96P15 392 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 MIR1-1HGQ9H1L0 117 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 C6orf106Q9H6K1 298 aaPredicted RBP13.84□□□□□ -0.19
CPSF6-204ENST00000547486 POPDC2Q9HBU9 364 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 SIX2Q9NPC8 291 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 APEX2Q9UBZ4 518 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 NFE2L3Q9Y4A8 694 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 EPG5Q9HCE0 2579 aa13.84□□□□□ -0.19
CPSF6-204ENST00000547486 PCDH15Q96QU1 1955 aa13.83□□□□□ -0.19
CPSF6-204ENST00000547486 ASCC3Q8N3C0 2202 aaKnown RBP13.83□□□□□ -0.2
CPSF6-204ENST00000547486 A0A1B0GTW7 788 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 CAPN9O14815 690 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 TRUB2O95900 331 aaKnown RBP13.83□□□□□ -0.2
CPSF6-204ENST00000547486 ATP5BP06576 529 aaKnown RBP13.83□□□□□ -0.2
CPSF6-204ENST00000547486 CSKP41240 450 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 CTSOP43234 321 aaPredicted RBP13.83□□□□□ -0.2
CPSF6-204ENST00000547486 BNC1Q01954 994 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 GRIK2Q13002 908 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 PDCLQ13371 301 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 NNTQ13423 1086 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 EXOC3L4Q17RC7 722 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 RAP1GAP2Q684P5 730 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 DPY19L2P1Q6NXN4 242 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 LGI2Q8N0V4 545 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 CARNMT1Q8N4J0 409 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 MLKLQ8NB16 471 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 CPXM1Q96SM3 734 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 DDX50Q9BQ39 737 aaKnown RBP13.83□□□□□ -0.2
CPSF6-204ENST00000547486 LHX5Q9H2C1 402 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 SLC32A1Q9H598 525 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 THAP9Q9H5L6 903 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 IL21RQ9HBE5 538 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 SUSD2Q9UGT4 822 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 EIF2B4Q9UI10 523 aaKnown RBP13.83□□□□□ -0.2
CPSF6-204ENST00000547486 CHD8Q9HCK8 2581 aa13.83□□□□□ -0.2
CPSF6-204ENST00000547486 GTPBP10A4D1E9 387 aaKnown RBP13.82□□□□□ -0.2
CPSF6-204ENST00000547486 KCNU1A8MYU2 1149 aa13.82□□□□□ -0.2
CPSF6-204ENST00000547486 C1QTNF9BB2RNN3 333 aa13.82□□□□□ -0.2
CPSF6-204ENST00000547486 FOXN3O00409 490 aaPredicted RBP13.82□□□□□ -0.2
CPSF6-204ENST00000547486 BCAT2O15382 392 aaPredicted RBP13.82□□□□□ -0.2
CPSF6-204ENST00000547486 SH3BP5O60239 455 aa13.82□□□□□ -0.2
CPSF6-204ENST00000547486 C1QTNF9P0C862 333 aa13.82□□□□□ -0.2
CPSF6-204ENST00000547486 PNMA6AP0CW24 399 aaPredicted RBP13.82□□□□□ -0.2
CPSF6-204ENST00000547486 TACR2P21452 398 aa13.82□□□□□ -0.2
CPSF6-204ENST00000547486 CLCN1P35523 988 aa13.82□□□□□ -0.2
CPSF6-204ENST00000547486 SIM1P81133 766 aaPredicted RBP13.82□□□□□ -0.2
CPSF6-204ENST00000547486 PITRM1Q5JRX3 1037 aa13.82□□□□□ -0.2
CPSF6-204ENST00000547486 PASD1Q8IV76 773 aa13.82□□□□□ -0.2
CPSF6-204ENST00000547486 APCDD1Q8J025 514 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms