RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 CHRNB2P17787 502 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 GABRG2P18507 467 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 ARID5AQ03989 594 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 PLK5Q496M5 336 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 TTC39BQ5VTQ0 682 aaPredicted RBP16.46■□□□□ 0.23
DDX54-204ENST00000546898 RAP1GAP2Q684P5 730 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 TMEM215Q68D42 235 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 CHST9Q7L1S5 443 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 PGBD3Q8N328 593 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 FIBINQ8TAL6 211 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 CPA5Q8WXQ8 436 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 RNF34Q969K3 372 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 NT5C3BQ969T7 300 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 PGAP3Q96FM1 320 aaPredicted RBP16.46■□□□□ 0.23
DDX54-204ENST00000546898 DUSP15Q9H1R2 295 aaPredicted RBP16.46■□□□□ 0.23
DDX54-204ENST00000546898 XPO7Q9UIA9 1087 aaKnown RBP16.46■□□□□ 0.23
DDX54-204ENST00000546898 PAXBP1Q9Y5B6 917 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 PCDHGA5Q9Y5G8 931 aa16.46■□□□□ 0.23
DDX54-204ENST00000546898 FRYLO94915 3013 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 SYNJ2BP-COX16A0A087WUM0 186 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 M0QYT0 321 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 FOXD2O60548 495 aaPredicted RBP16.45■□□□□ 0.22
DDX54-204ENST00000546898 F9P00740 461 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 FERP16591 822 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 MMP8P22894 467 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 P2RY2P41231 377 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 IL12RB1P42701 662 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 SULT1E1P49888 294 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 RPS24P62847 133 aaKnown RBP16.45■□□□□ 0.22
DDX54-204ENST00000546898 CENPCQ03188 943 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 NME3Q13232 169 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 CDH18Q13634 790 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 ZNF234Q14588 700 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 SLC25A52Q3SY17 297 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 BRMS1LQ5PSV4 323 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 RABGAP1LQ5R372 815 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 OTUD1Q5VV17 481 aaPredicted RBP16.45■□□□□ 0.22
DDX54-204ENST00000546898 SND1Q7KZF4 910 aaKnown RBP eCLIP16.45■□□□□ 0.22
DDX54-204ENST00000546898 KIAA2013Q8IYS2 634 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 LGI2Q8N0V4 545 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 WFDC5Q8TCV5 224 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 PRMT1Q99873 361 aaKnown RBP16.45■□□□□ 0.22
DDX54-204ENST00000546898 CBX8Q9HC52 389 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 COX16Q9P0S2 106 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 STIM2Q9P246 746 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 DOCK4Q8N1I0 1966 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 CFAP54Q96N23 3096 aa16.45■□□□□ 0.22
DDX54-204ENST00000546898 GOLGA8SH3BPF8 625 aa16.44■□□□□ 0.22
DDX54-204ENST00000546898 LUC7L3O95232 432 aaKnown RBP16.44■□□□□ 0.22
DDX54-204ENST00000546898 ATP5BP06576 529 aaKnown RBP16.44■□□□□ 0.22
DDX54-204ENST00000546898 UNGP13051 313 aaPredicted RBP16.44■□□□□ 0.22
DDX54-204ENST00000546898 CD70P32970 193 aa16.44■□□□□ 0.22
DDX54-204ENST00000546898 FLT3P36888 993 aa16.44■□□□□ 0.22
DDX54-204ENST00000546898 NSFP46459 744 aaKnown RBP16.44■□□□□ 0.22
DDX54-204ENST00000546898 GSCP56915 257 aaPredicted RBP16.44■□□□□ 0.22
DDX54-204ENST00000546898 RNASE9P60153 205 aaKnown RBP16.44■□□□□ 0.22
DDX54-204ENST00000546898 C2CD6Q53TS8 623 aa16.44■□□□□ 0.22
DDX54-204ENST00000546898 ACBD5Q5T8D3 534 aaPredicted RBP16.44■□□□□ 0.22
DDX54-204ENST00000546898 PMS2CLQ68D20 193 aa16.44■□□□□ 0.22
DDX54-204ENST00000546898 MBLAC2Q68D91 279 aa16.44■□□□□ 0.22
DDX54-204ENST00000546898 KIAA1211LQ6NV74 962 aa16.44■□□□□ 0.22
DDX54-204ENST00000546898 MMS22LQ6ZRQ5 1243 aa16.44■□□□□ 0.22
DDX54-204ENST00000546898 ADIPOR2Q86V24 386 aa16.44■□□□□ 0.22
DDX54-204ENST00000546898 CARNMT1Q8N4J0 409 aa16.44■□□□□ 0.22
DDX54-204ENST00000546898 MYEOVQ96EZ4 313 aa16.44■□□□□ 0.22
DDX54-204ENST00000546898 PIGVQ9NUD9 493 aa16.44■□□□□ 0.22
DDX54-204ENST00000546898 TMEM59LQ9UK28 342 aa16.44■□□□□ 0.22
DDX54-204ENST00000546898 USP18Q9UMW8 372 aa16.44■□□□□ 0.22
DDX54-204ENST00000546898 RAD54BQ9Y620 910 aa16.44■□□□□ 0.22
DDX54-204ENST00000546898 A0A1B0GVM2 712 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 TCAF2A6NFQ2 919 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 WASH3PC4AMC7 463 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 DCLK1O15075 740 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 ZNF217O75362 1048 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 SERPINC1P01008 464 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 ASLP04424 464 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 CALB1P05937 261 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 DLDP09622 509 aaKnown RBP16.43■□□□□ 0.22
DDX54-204ENST00000546898 POLR2EP19388 210 aaKnown RBP16.43■□□□□ 0.22
DDX54-204ENST00000546898 NDUFV2P19404 249 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 TGM1P22735 817 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 CXCR3P49682 368 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 LMNB2Q03252 620 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 DEUP1Q05D60 604 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 SPEM2Q0P670 501 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 LMAN2Q12907 356 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 CSRP2Q16527 193 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 CLEC16AQ2KHT3 1053 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 MAP7D1Q3KQU3 841 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 ZSCAN23Q3MJ62 389 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 FUT11Q495W5 492 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 SERPINA13PQ6UXR4 307 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 PHF13Q86YI8 300 aaPredicted RBP16.43■□□□□ 0.22
DDX54-204ENST00000546898 BAP1Q92560 729 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 LMLNQ96KR4 655 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 TBCBQ99426 244 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 AGPAT1Q99943 283 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 C11orf70Q9BRQ4 267 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 PARD6AQ9NPB6 346 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 METTL5Q9NRN9 209 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms