RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 RHOT1Q8IXI2 618 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 AHI1Q8N157 1196 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 C12orf43Q96C57 262 aaKnown RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 OTUD5Q96G74 571 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 EGLN2Q96KS0 407 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 SENP7Q9BQF6 1050 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 CDH19Q9H159 772 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 IRF2BPLQ9H1B7 796 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 C17orf75Q9HAS0 396 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 KLHL11Q9NVR0 708 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 MAP3K20Q9NYL2 800 aaKnown RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 PACSIN3Q9UKS6 424 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 CDC14AQ9UNH5 594 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 SCAF8Q9UPN6 1271 aaKnown RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 DNAJC16Q9Y2G8 782 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 PCDHGA11Q9Y5H2 935 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 CORINQ9Y5Q5 1042 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 DOCK1Q14185 1865 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 A0A1W2PPW3 197 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 KMOO15229 486 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 LIASO43766 372 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 STAM2O75886 525 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 RAD17O75943 681 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 ESRRBO95718 433 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 MSL3P1P0C860 447 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 ZSCAN5DPP0CG00 497 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 KRT4P19013 534 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 NLRP11P59045 1033 aaKnown RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 STAT4Q14765 748 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 TWF2Q6IBS0 349 aaKnown RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 DHRS4L2Q6PKH6 230 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 PHF13Q86YI8 300 aaPredicted RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 ELMOD1Q8N336 334 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 CCDC89Q8N998 374 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 BRSK1Q8TDC3 778 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 EFHD2Q96C19 240 aaPredicted RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 WRNIP1Q96S55 665 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 RMDN3Q96TC7 470 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 B3GNT4Q9C0J1 378 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 MANSC1Q9H8J5 431 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 MARCOQ9UEW3 520 aaPredicted RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 CNTN6Q9UQ52 1028 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 GNEQ9Y223 722 aaKnown RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 MTO1Q9Y2Z2 717 aaKnown RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 PHIPQ8WWQ0 1821 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 SRCAPQ6ZRS2 3230 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 ANK1P16157 1881 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 TCRBV5S1A1TA0A578 114 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 TAF4O00268 1085 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 HLA-DRAP01903 254 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 ABCB1P08183 1280 aaPredicted RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 ASNSP08243 561 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 ETS1P14921 441 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 ACADSBP45954 432 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 PGS1Q32NB8 556 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 DNAL1Q4LDG9 190 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 CEP78Q5JTW2 689 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 FKBP1CQ5VVH2 108 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 DCLRE1AQ6PJP8 1040 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 RALGPS2Q86X27 583 aaPredicted RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 ABRAQ8N0Z2 381 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 LARGE2Q8N3Y3 721 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 CEP170P1Q96L14 293 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 RILPQ96NA2 401 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 RANBP9Q96S59 729 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 HAUS8Q9BT25 410 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 TP63Q9H3D4 680 aaPredicted RBP8.09□□□□□ -1.11
UBR1-202ENST00000546274 ZNF696Q9H7X3 374 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 FKBP14Q9NWM8 211 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 IGSF9Q9P2J2 1179 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 TXNDC16Q9P2K2 825 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 GABBR1Q9UBS5 961 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 DNPEPQ9ULA0 475 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 PLA2G4CQ9UP65 541 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 IFT52Q9Y366 437 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 SPEF1Q9Y4P9 236 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 PCDHA10Q9Y5I2 948 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 STYXL1Q9Y6J8 313 aa8.09□□□□□ -1.11
UBR1-202ENST00000546274 DENRO43583 198 aaKnown RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 EXTL3O43909 919 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 EDN1P05305 212 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 PTPN2P17706 415 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 CD247P20963 164 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 RPL7AP62424 266 aaKnown RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 XIAPP98170 497 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 APOFQ13790 326 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 CCNIQ14094 377 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 STK11Q15831 433 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 ZBTB41Q5SVQ8 909 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 TTC23LQ6PF05 361 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 FAM83AQ86UY5 434 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 SLC15A4Q8N697 577 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 BBOF1Q8ND07 529 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 ZNF398Q8TD17 642 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 TRPC4APQ8TEL6 797 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 ZBED3Q96IU2 234 aaPredicted RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 CDHR1Q96JP9 859 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 SLITRK1Q96PX8 696 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 KCNK13Q9HB14 408 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms