RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 BTBD7Q9P203 1132 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 ATXN10Q9UBB4 475 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 BCAP29Q9UHQ4 241 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 DTNAQ9Y4J8 743 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 C15orf38-AP3S2A0A0A6YYH1 394 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 WDR27A2RRH5 827 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 A6NJR5 290 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 SPDYE16A6NNV3 312 aaPredicted RBP8.99□□□□□ -0.97
TDP1-204ENST00000545686 LACTBL1A8MY62 500 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 INO80B-WBP1J3KQ70 363 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 CREB3O43889 395 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 STK10O94804 968 aaKnown RBP8.99□□□□□ -0.97
TDP1-204ENST00000545686 SCNN1AP37088 669 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 GP5P40197 560 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 GRIA2P42262 883 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 NDST1P52848 882 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 HDAC4P56524 1084 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 GBE1Q04446 702 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 SNAPC2Q13487 334 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 FRG1Q14331 258 aaKnown RBP8.99□□□□□ -0.97
TDP1-204ENST00000545686 R3HDM1Q15032 1099 aaKnown RBP8.99□□□□□ -0.97
TDP1-204ENST00000545686 FAM187BQ17R55 369 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 GOLGA7BQ2TAP0 167 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 PKDCCQ504Y2 493 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 LRRC23Q53EV4 343 aaPredicted RBP8.99□□□□□ -0.97
TDP1-204ENST00000545686 PPP6R3Q5H9R7 873 aaPredicted RBP8.99□□□□□ -0.97
TDP1-204ENST00000545686 MAP1SQ66K74 1059 aaPredicted RBP8.99□□□□□ -0.97
TDP1-204ENST00000545686 KCNT2Q6UVM3 1135 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 EPGNQ6UW88 154 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 FRMD7Q6ZUT3 714 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 PLPPR4Q7Z2D5 763 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 ARPINQ7Z6K5 226 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 TMEM110Q86TL2 294 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 PQLC1Q8N2U9 271 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 ZFRQ96KR1 1074 aaKnown RBP8.99□□□□□ -0.97
TDP1-204ENST00000545686 SERPINI1Q99574 410 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 CPNE1Q99829 537 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 INO80BQ9C086 356 aaPredicted RBP8.99□□□□□ -0.97
TDP1-204ENST00000545686 PRMT7Q9NVM4 692 aaPredicted RBP8.99□□□□□ -0.97
TDP1-204ENST00000545686 PNPOQ9NVS9 261 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 RCOR3Q9P2K3 495 aaPredicted RBP8.99□□□□□ -0.97
TDP1-204ENST00000545686 HESX1Q9UBX0 185 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 STK39Q9UEW8 545 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 VPS28Q9UK41 221 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 RAB26Q9ULW5 256 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 AFG3L2Q9Y4W6 797 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 MCM3APO60318 1980 aa8.99□□□□□ -0.97
TDP1-204ENST00000545686 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.98□□□□□ -0.97
TDP1-204ENST00000545686 BTBD19C9JJ37 291 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 GPR25O00155 361 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 B4GALT5O43286 388 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 GRAP2O75791 330 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 DGKIO75912 1065 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 APBA3O96018 575 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 STAG3L1P0CL83 205 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 SMIM18P0DKX4 95 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 CPA3P15088 417 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 VAV1P15498 845 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 ADORA2AP29274 412 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 ALDH1A3P47895 512 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 SERPINB8P50452 374 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 FOLH1Q04609 750 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 KLF10Q13118 480 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 PRKG1Q13976 671 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 SPANXN3Q5MJ09 141 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 RARS2Q5T160 578 aaKnown RBP8.98□□□□□ -0.97
TDP1-204ENST00000545686 GRTP1Q5TC63 336 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 C16orf89Q6UX73 402 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 SETD3Q86TU7 594 aaPredicted RBP8.98□□□□□ -0.97
TDP1-204ENST00000545686 NT5DC4Q86YG4 428 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 HPS6Q86YV9 775 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 TMEM192Q8IY95 271 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 LRRC71Q8N4P6 559 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 FAM81AQ8TBF8 368 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 HTR3CQ8WXA8 447 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 CENPIQ92674 756 aaPredicted RBP8.98□□□□□ -0.97
TDP1-204ENST00000545686 CCDC124Q96CT7 223 aaKnown RBP8.98□□□□□ -0.97
TDP1-204ENST00000545686 DGCR14Q96DF8 476 aaKnown RBP8.98□□□□□ -0.97
TDP1-204ENST00000545686 CNDP1Q96KN2 507 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 MMP19Q99542 508 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 C11orf84Q9BUA3 381 aaPredicted RBP8.98□□□□□ -0.97
TDP1-204ENST00000545686 CDH19Q9H159 772 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 CYP4F11Q9HBI6 524 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 TXNDC16Q9P2K2 825 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 KPNA7A9QM74 516 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 MAP3K6O95382 1288 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 NCF2P19878 526 aaPredicted RBP8.98□□□□□ -0.97
TDP1-204ENST00000545686 ADSLP30566 484 aaPredicted RBP8.98□□□□□ -0.97
TDP1-204ENST00000545686 ARRB2P32121 409 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 GRIA1P42261 906 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 RPL5P46777 297 aaKnown RBP8.98□□□□□ -0.97
TDP1-204ENST00000545686 HSPA13P48723 471 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 SLC26A2P50443 739 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 POU5F1BQ06416 359 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 FSTL1Q12841 308 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 SLC10A2Q12908 348 aaPredicted RBP8.98□□□□□ -0.97
TDP1-204ENST00000545686 LRRC36Q1X8D7 754 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 GRAMD1BQ3KR37 738 aa8.98□□□□□ -0.97
TDP1-204ENST00000545686 PABPC1LQ4VXU2 614 aaKnown RBP8.98□□□□□ -0.97
TDP1-204ENST00000545686 TCHHL1Q5QJ38 904 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms