RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 MFSD2AQ8NA29 543 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 FBXO18Q8NFZ0 1043 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 MAPK15Q8TD08 544 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 LIN37Q96GY3 246 aaPredicted RBP16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 SLC25A18Q9H1K4 315 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 ENTPD2Q9Y5L3 495 aa16.11■□□□□ 0.17
CLSTN3-216ENST00000545663 POLQO75417 2590 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 PPFIA2O75334 1257 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 PRPF6O94906 941 aaKnown RBP16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 LDHAP00338 332 aaKnown RBP16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 SFTPCP11686 197 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 PPP2CBP62714 309 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 PPP2CAP67775 309 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 ANKRD1Q15327 319 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 SLC45A4Q5BKX6 768 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 TRAPPC11Q7Z392 1133 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 CLEC14AQ86T13 490 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 GOLGA1Q92805 767 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 JAKMIP2Q96AA8 810 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 ARRDC3Q96B67 414 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 SMARCD1Q96GM5 515 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 APOLD1Q96LR9 279 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 SLC2A11Q9BYW1 496 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 FBXO44Q9H4M3 255 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 FBRSQ9HAH7 460 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 TJP2Q9UDY2 1190 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 PLEKHB1Q9UF11 243 aaPredicted RBP16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 SCML2Q9UQR0 700 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 CA5BQ9Y2D0 317 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 PCDHGA8Q9Y5G5 932 aa16.1■□□□□ 0.17
CLSTN3-216ENST00000545663 KIF26BQ2KJY2 2108 aa16.09■□□□□ 0.17
CLSTN3-216ENST00000545663 CYBBP04839 570 aa16.09■□□□□ 0.17
CLSTN3-216ENST00000545663 THEGLP0DJG4 465 aa16.09■□□□□ 0.17
CLSTN3-216ENST00000545663 CCDC130P13994 396 aa16.09■□□□□ 0.17
CLSTN3-216ENST00000545663 AFMP43652 599 aa16.09■□□□□ 0.17
CLSTN3-216ENST00000545663 CASP5P51878 434 aa16.09■□□□□ 0.17
CLSTN3-216ENST00000545663 INHBCP55103 352 aa16.09■□□□□ 0.17
CLSTN3-216ENST00000545663 KLHDC10Q6PID8 442 aa16.09■□□□□ 0.17
CLSTN3-216ENST00000545663 SCD5Q86SK9 330 aa16.09■□□□□ 0.17
CLSTN3-216ENST00000545663 ELMO3Q96BJ8 720 aa16.09■□□□□ 0.17
CLSTN3-216ENST00000545663 ACCSQ96QU6 501 aa16.09■□□□□ 0.17
CLSTN3-216ENST00000545663 OMDQ99983 421 aa16.09■□□□□ 0.17
CLSTN3-216ENST00000545663 ABCB8Q9NUT2 735 aa16.09■□□□□ 0.17
CLSTN3-216ENST00000545663 ZNF510Q9Y2H8 683 aa16.09■□□□□ 0.17
CLSTN3-216ENST00000545663 ATP8B3O60423 1300 aa16.09■□□□□ 0.17
CLSTN3-216ENST00000545663 CACNA1DQ01668 2161 aa16.09■□□□□ 0.17
CLSTN3-216ENST00000545663 SIN3BO75182 1162 aa16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 GARTP22102 1010 aa16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 HOXD9P28356 352 aaPredicted RBP16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 TNNC1P63316 161 aa16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 CST6Q15828 149 aa16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 L1TD1Q5T7N2 865 aaKnown RBP16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 MBLAC2Q68D91 279 aa16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 NAPEPLDQ6IQ20 393 aa16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 CBWD2Q8IUF1 395 aa16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 MMAAQ8IVH4 418 aaKnown RBP16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 ARL14Q8N4G2 192 aa16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 AADATQ8N5Z0 425 aa16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 OR14C36Q8NHC7 312 aa16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 IFI44Q8TCB0 444 aa16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 RAD54LQ92698 747 aa16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 FGFBP2Q9BYJ0 223 aa16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 SMYD3Q9H7B4 428 aa16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 ARHGAP20Q9P2F6 1191 aa16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 SUN2Q9UH99 717 aa16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 COL27A1Q8IZC6 1860 aaPredicted RBP16.08■□□□□ 0.16
CLSTN3-216ENST00000545663 SETD2Q9BYW2 2564 aaPredicted RBP16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 LATO43561 262 aa16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 LZTS3O60299 673 aaPredicted RBP16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 GP1BAP07359 652 aa16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 DLDP09622 509 aaKnown RBP16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 FAM163BP0C2L3 166 aa16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 WT1P19544 449 aaPredicted RBP16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 MAT2AP31153 395 aaKnown RBP16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 SLC8A1P32418 973 aa16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 ADPRHP54922 357 aa16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 EFEMP1Q12805 493 aa16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 SFSWAPQ12872 951 aaKnown RBP16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 POM121L1PQ3SYA9 428 aa16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 CRTC1Q6UUV9 634 aa16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 ACOT1Q86TX2 421 aa16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 ZNF564Q8TBZ8 553 aaPredicted RBP16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 SLC2A14Q8TDB8 520 aa16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 HPS3Q969F9 1004 aa16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 HVCN1Q96D96 273 aa16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 MRPL44Q9H9J2 332 aaKnown RBP16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 CSNK1G1Q9HCP0 422 aa16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 GEMIN8Q9NWZ8 242 aaKnown RBP16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 RASAL2Q9UJF2 1139 aa16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 NAGPAQ9UK23 515 aa16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 SCML1Q9UN30 329 aa16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 EXOC7Q9UPT5 735 aa16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 PLAAQ9Y263 795 aa16.07■□□□□ 0.16
CLSTN3-216ENST00000545663 OTOGQ6ZRI0 2925 aa16.06■□□□□ 0.16
CLSTN3-216ENST00000545663 TBC1D3DA0A087WVF3 549 aa16.06■□□□□ 0.16
CLSTN3-216ENST00000545663 TBC1D3IA0A087WXS9 549 aa16.06■□□□□ 0.16
CLSTN3-216ENST00000545663 TBC1D3EA0A087X179 549 aa16.06■□□□□ 0.16
CLSTN3-216ENST00000545663 TBC1D3KA0A087X1G2 549 aa16.06■□□□□ 0.16
CLSTN3-216ENST00000545663 TBC1D3FA6NER0 549 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms