RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 GOLGA6L7A0A1B0GV03 622 aa8.82□□□□□ -1
USP28-215ENST00000545608 GOLGA6L4A6NEF3 574 aa8.82□□□□□ -1
USP28-215ENST00000545608 METTL12A8MUP2 240 aa8.82□□□□□ -1
USP28-215ENST00000545608 MEI4A8MW99 385 aa8.82□□□□□ -1
USP28-215ENST00000545608 EPHX1P07099 455 aa8.82□□□□□ -1
USP28-215ENST00000545608 CCNYL3P0C7X3 344 aa8.82□□□□□ -1
USP28-215ENST00000545608 SETSIPP0DME0 302 aa8.82□□□□□ -1
USP28-215ENST00000545608 GNSP15586 552 aa8.82□□□□□ -1
USP28-215ENST00000545608 TBXAS1P24557 533 aaPredicted RBP8.82□□□□□ -1
USP28-215ENST00000545608 BRD2P25440 801 aaKnown RBP8.82□□□□□ -1
USP28-215ENST00000545608 OXTRP30559 389 aa8.82□□□□□ -1
USP28-215ENST00000545608 ANP32AP39687 249 aaKnown RBP8.82□□□□□ -1
USP28-215ENST00000545608 FMO5P49326 533 aa8.82□□□□□ -1
USP28-215ENST00000545608 SGSHP51688 502 aa8.82□□□□□ -1
USP28-215ENST00000545608 PTK2Q05397 1052 aa8.82□□□□□ -1
USP28-215ENST00000545608 GRIK2Q13002 908 aa8.82□□□□□ -1
USP28-215ENST00000545608 CNGA2Q16280 664 aa8.82□□□□□ -1
USP28-215ENST00000545608 ADGRF1Q5T601 910 aa8.82□□□□□ -1
USP28-215ENST00000545608 DCAF12L1Q5VU92 463 aa8.82□□□□□ -1
USP28-215ENST00000545608 PMF1Q6P1K2 205 aa8.82□□□□□ -1
USP28-215ENST00000545608 TMEM270Q6UE05 265 aa8.82□□□□□ -1
USP28-215ENST00000545608 SERPINA13PQ6UXR4 307 aa8.82□□□□□ -1
USP28-215ENST00000545608 CHST9Q7L1S5 443 aa8.82□□□□□ -1
USP28-215ENST00000545608 KIAA0907Q7Z7F0 614 aaPredicted RBP8.82□□□□□ -1
USP28-215ENST00000545608 ADIPOR2Q86V24 386 aa8.82□□□□□ -1
USP28-215ENST00000545608 SIX6OS1Q8N1H7 587 aa8.82□□□□□ -1
USP28-215ENST00000545608 SCML4Q8N228 414 aa8.82□□□□□ -1
USP28-215ENST00000545608 ZCCHC9Q8N567 271 aaKnown RBP8.82□□□□□ -1
USP28-215ENST00000545608 ZNF366Q8N895 744 aa8.82□□□□□ -1
USP28-215ENST00000545608 CADM4Q8NFZ8 388 aa8.82□□□□□ -1
USP28-215ENST00000545608 LMO3Q8TAP4 145 aa8.82□□□□□ -1
USP28-215ENST00000545608 WFDC5Q8TCV5 224 aa8.82□□□□□ -1
USP28-215ENST00000545608 CYB5D2Q8WUJ1 264 aa8.82□□□□□ -1
USP28-215ENST00000545608 SLC35F5Q8WV83 523 aa8.82□□□□□ -1
USP28-215ENST00000545608 SPSB2Q99619 263 aa8.82□□□□□ -1
USP28-215ENST00000545608 MIR1-1HGQ9H1L0 117 aa8.82□□□□□ -1
USP28-215ENST00000545608 TMEM245Q9H330 911 aa8.82□□□□□ -1
USP28-215ENST00000545608 METTL14Q9HCE5 456 aaKnown RBP8.82□□□□□ -1
USP28-215ENST00000545608 CNGB3Q9NQW8 809 aa8.82□□□□□ -1
USP28-215ENST00000545608 ABCB8Q9NUT2 735 aa8.82□□□□□ -1
USP28-215ENST00000545608 SUSD2Q9UGT4 822 aa8.82□□□□□ -1
USP28-215ENST00000545608 MAN1B1Q9UKM7 699 aa8.82□□□□□ -1
USP28-215ENST00000545608 KLK13Q9UKR3 277 aa8.82□□□□□ -1
USP28-215ENST00000545608 GPSM3Q9Y4H4 160 aa8.82□□□□□ -1
USP28-215ENST00000545608 PCDHB4Q9Y5E5 795 aa8.82□□□□□ -1
USP28-215ENST00000545608 PCDH15Q96QU1 1955 aa8.81□□□□□ -1
USP28-215ENST00000545608 A0A1B0GTW7 788 aa8.81□□□□□ -1
USP28-215ENST00000545608 PMM2O15305 246 aa8.81□□□□□ -1
USP28-215ENST00000545608 LATS1O95835 1130 aa8.81□□□□□ -1
USP28-215ENST00000545608 IGLV3-19P01714 112 aa8.81□□□□□ -1
USP28-215ENST00000545608 PAEPP09466 180 aa8.81□□□□□ -1
USP28-215ENST00000545608 ACADMP11310 421 aa8.81□□□□□ -1
USP28-215ENST00000545608 PABPC1P11940 636 aaKnown RBP8.81□□□□□ -1
USP28-215ENST00000545608 BMP6P22004 513 aa8.81□□□□□ -1
USP28-215ENST00000545608 SLC6A4P31645 630 aa8.81□□□□□ -1
USP28-215ENST00000545608 BNC1Q01954 994 aa8.81□□□□□ -1
USP28-215ENST00000545608 ARID5AQ03989 594 aa8.81□□□□□ -1
USP28-215ENST00000545608 SLC14A1Q13336 389 aa8.81□□□□□ -1
USP28-215ENST00000545608 CAMK2GQ13555 558 aaPredicted RBP8.81□□□□□ -1
USP28-215ENST00000545608 E2F5Q15329 346 aa8.81□□□□□ -1
USP28-215ENST00000545608 PIK3R6Q5UE93 754 aa8.81□□□□□ -1
USP28-215ENST00000545608 MBLAC2Q68D91 279 aa8.81□□□□□ -1
USP28-215ENST00000545608 MSANTD2Q6P1R3 559 aa8.81□□□□□ -1
USP28-215ENST00000545608 RFWD3Q6PCD5 774 aa8.81□□□□□ -1
USP28-215ENST00000545608 RRAGAQ7L523 313 aa8.81□□□□□ -1
USP28-215ENST00000545608 FAM124AQ86V42 546 aa8.81□□□□□ -1
USP28-215ENST00000545608 ARHGEF19Q8IW93 802 aa8.81□□□□□ -1
USP28-215ENST00000545608 PPM1KQ8N3J5 372 aa8.81□□□□□ -1
USP28-215ENST00000545608 CHCHD4Q8N4Q1 142 aa8.81□□□□□ -1
USP28-215ENST00000545608 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.81□□□□□ -1
USP28-215ENST00000545608 OR2T3Q8NH03 318 aa8.81□□□□□ -1
USP28-215ENST00000545608 WFIKKN2Q8TEU8 576 aa8.81□□□□□ -1
USP28-215ENST00000545608 CLEC4CQ8WTT0 213 aa8.81□□□□□ -1
USP28-215ENST00000545608 MYEOVQ96EZ4 313 aa8.81□□□□□ -1
USP28-215ENST00000545608 DHTKD1Q96HY7 919 aaPredicted RBP8.81□□□□□ -1
USP28-215ENST00000545608 CEP63Q96MT8 703 aa8.81□□□□□ -1
USP28-215ENST00000545608 TIGD1Q96MW7 591 aa8.81□□□□□ -1
USP28-215ENST00000545608 NT5C1BQ96P26 610 aa8.81□□□□□ -1
USP28-215ENST00000545608 NUP58Q9BVL2 599 aa8.81□□□□□ -1
USP28-215ENST00000545608 LHX5Q9H2C1 402 aa8.81□□□□□ -1
USP28-215ENST00000545608 IL21RQ9HBE5 538 aa8.81□□□□□ -1
USP28-215ENST00000545608 EVA1BQ9NVM1 165 aa8.81□□□□□ -1
USP28-215ENST00000545608 EIF2B4Q9UI10 523 aaKnown RBP8.81□□□□□ -1
USP28-215ENST00000545608 GGA2Q9UJY4 613 aa8.81□□□□□ -1
USP28-215ENST00000545608 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.81□□□□□ -1
USP28-215ENST00000545608 MSRB2Q9Y3D2 182 aa8.81□□□□□ -1
USP28-215ENST00000545608 NFE2L3Q9Y4A8 694 aa8.81□□□□□ -1
USP28-215ENST00000545608 NEUROG3Q9Y4Z2 214 aa8.81□□□□□ -1
USP28-215ENST00000545608 SLCO1B1Q9Y6L6 691 aa8.81□□□□□ -1
USP28-215ENST00000545608 ADAMTS9Q9P2N4 1935 aa8.8□□□□□ -1
USP28-215ENST00000545608 M0QYV0 167 aa8.8□□□□□ -1
USP28-215ENST00000545608 PSMA7O14818 248 aa8.8□□□□□ -1
USP28-215ENST00000545608 BCAT2O15382 392 aaPredicted RBP8.8□□□□□ -1
USP28-215ENST00000545608 ACSL4O60488 711 aa8.8□□□□□ -1
USP28-215ENST00000545608 TBL1XO60907 577 aa8.8□□□□□ -1
USP28-215ENST00000545608 DXOO77932 396 aaKnown RBP8.8□□□□□ -1
USP28-215ENST00000545608 IGLV3-27P01718 113 aa8.8□□□□□ -1
USP28-215ENST00000545608 LTFP02788 710 aa8.8□□□□□ -1
USP28-215ENST00000545608 FYNP06241 537 aa8.8□□□□□ -1
USP28-215ENST00000545608 CD70P32970 193 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms