RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 MSS51Q4VC12 460 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 CCDC38Q502W7 563 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 ANKRD20A2Q5SQ80 823 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 ACBD5Q5T8D3 534 aaPredicted RBP13.13□□□□□ -0.31
PAAF1-214ENST00000544552 ANKRD20A1Q5TYW2 823 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 MANEALQ5VSG8 457 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 SDHAF4Q5VUM1 108 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 ANKRD20A3Q5VUR7 823 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 ZNF276Q8N554 614 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 TTC9BQ8N6N2 239 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 ATP11CQ8NB49 1132 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 HDAC11Q96DB2 347 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 LRRC39Q96DD0 335 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 P2RY11Q96G91 374 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 LGMNQ99538 433 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 TTLL2Q9BWV7 592 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 RC3H2Q9HBD1 1191 aaKnown RBP13.13□□□□□ -0.31
PAAF1-214ENST00000544552 TLR8Q9NR97 1041 aaKnown RBP13.13□□□□□ -0.31
PAAF1-214ENST00000544552 EURLQ9NYK6 297 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 SFMBT1Q9UHJ3 866 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 SLC12A6Q9UHW9 1150 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 LTBP2Q14767 1821 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 FGF10O15520 208 aaPredicted RBP13.13□□□□□ -0.31
PAAF1-214ENST00000544552 PAGE1O75459 146 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 SPAG6O75602 509 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 METTL18O95568 372 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 ZDHHC11BP0C7U3 371 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 ATP2A2P16615 1042 aaKnown RBP13.13□□□□□ -0.31
PAAF1-214ENST00000544552 MDH1P40925 334 aaKnown RBP13.13□□□□□ -0.31
PAAF1-214ENST00000544552 TUFMP49411 452 aaKnown RBP13.13□□□□□ -0.31
PAAF1-214ENST00000544552 IRAK1P51617 712 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 MLLT6P55198 1093 aaPredicted RBP13.13□□□□□ -0.31
PAAF1-214ENST00000544552 GALNT2Q10471 571 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 DUSP4Q13115 394 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 MTA1Q13330 715 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 PARP6Q2NL67 630 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 DNAJC21Q5F1R6 531 aaKnown RBP13.13□□□□□ -0.31
PAAF1-214ENST00000544552 ARHGEF18Q6ZSZ5 1173 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 CCDC13Q8IYE1 715 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 CMTR2Q8IYT2 770 aaKnown RBP13.13□□□□□ -0.31
PAAF1-214ENST00000544552 LZTR1Q8N653 840 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 FBXO32Q969P5 355 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 VAT1Q99536 393 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 CRISPLD1Q9H336 500 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 EIF2B3Q9NR50 452 aaKnown RBP13.13□□□□□ -0.31
PAAF1-214ENST00000544552 GMIPQ9P107 970 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 FNIP2Q9P278 1114 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 IGSF9Q9P2J2 1179 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 PRKAG2Q9UGJ0 569 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 SLC27A5Q9Y2P5 690 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 CDY1Q9Y6F8 540 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.13□□□□□ -0.31
PAAF1-214ENST00000544552 TEX264Q9Y6I9 313 aa13.13□□□□□ -0.31
PAAF1-214ENST00000544552 ZNF638Q14966 1978 aaKnown RBP13.12□□□□□ -0.31
PAAF1-214ENST00000544552 CLUHO75153 1309 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 GREB1Q4ZG55 1949 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 COL4A6Q14031 1691 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 MYO16Q9Y6X6 1858 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 SOD2P04179 222 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 APRTP07741 180 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 HPDP32754 393 aaPredicted RBP13.12□□□□□ -0.31
PAAF1-214ENST00000544552 MAGEA3P43357 314 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 MMP13P45452 471 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 SLCO1A2P46721 670 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 ATP1A2P50993 1020 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 GPX6P59796 221 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 IFI35P80217 286 aaPredicted RBP13.12□□□□□ -0.31
PAAF1-214ENST00000544552 SARNPP82979 210 aaKnown RBP13.12□□□□□ -0.31
PAAF1-214ENST00000544552 AP1B1Q10567 949 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 WASHC5Q12768 1159 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 PSMD5Q16401 504 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 BBS9Q3SYG4 887 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 ARTNQ5T4W7 220 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 TPGS2Q68CL5 300 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 PRSS55Q6UWB4 352 aaPredicted RBP13.12□□□□□ -0.31
PAAF1-214ENST00000544552 TAOK1Q7L7X3 1001 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 GPR65Q8IYL9 337 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 SLC39A11Q8N1S5 342 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 TAB3Q8N5C8 712 aaPredicted RBP13.12□□□□□ -0.31
PAAF1-214ENST00000544552 CCNYQ8ND76 341 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 FCRL2Q96LA5 508 aaPredicted RBP13.12□□□□□ -0.31
PAAF1-214ENST00000544552 ZNF558Q96NG5 402 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 SEPT5Q99719 369 aaPredicted RBP13.12□□□□□ -0.31
PAAF1-214ENST00000544552 WDR83Q9BRX9 315 aaKnown RBP13.12□□□□□ -0.31
PAAF1-214ENST00000544552 VN1R3Q9BXE9 311 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 UBE2OQ9C0C9 1292 aaKnown RBP13.12□□□□□ -0.31
PAAF1-214ENST00000544552 CATSPERBQ9H7T0 1116 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 VPS37BQ9H9H4 285 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 PRDM5Q9NQX1 630 aaPredicted RBP13.12□□□□□ -0.31
PAAF1-214ENST00000544552 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.12□□□□□ -0.31
PAAF1-214ENST00000544552 AFF4Q9UHB7 1163 aaKnown RBP13.12□□□□□ -0.31
PAAF1-214ENST00000544552 SLC24A2Q9UI40 661 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 NEU3Q9UQ49 428 aa13.12□□□□□ -0.31
PAAF1-214ENST00000544552 BRCA2P51587 3418 aa13.11□□□□□ -0.31
PAAF1-214ENST00000544552 WDR27A2RRH5 827 aa13.11□□□□□ -0.31
PAAF1-214ENST00000544552 TRIM43BA6NCK2 446 aa13.11□□□□□ -0.31
PAAF1-214ENST00000544552 SMIM23A6NLE4 172 aa13.11□□□□□ -0.31
PAAF1-214ENST00000544552 WASH4PA8MWX3 477 aa13.11□□□□□ -0.31
PAAF1-214ENST00000544552 RNF103O00237 685 aa13.11□□□□□ -0.31
PAAF1-214ENST00000544552 BAIAP3O94812 1187 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms