RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 RAET1EQ8TD07 263 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 TGFBRAP1Q8WUH2 860 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 THRSPQ92748 146 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 CIDECQ96AQ7 238 aaPredicted RBP9.11□□□□□ -0.95
VPS13D-212ENST00000543766 SIPA1Q96FS4 1042 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 ASB16Q96NS5 453 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 MVB12BQ9H7P6 319 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 C10orf88Q9H8K7 445 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 C20orf96Q9NUD7 363 aaPredicted RBP9.11□□□□□ -0.95
VPS13D-212ENST00000543766 DNAJC11Q9NVH1 559 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 SPASTQ9UBP0 616 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 TLK1Q9UKI8 766 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 SLC12A4Q9UP95 1085 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 ZMYM6O95789 1325 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 TMEM94Q12767 1356 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.11□□□□□ -0.95
VPS13D-212ENST00000543766 RHPN2P1A8MT19 583 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 H7C1D1 291 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 NDUFS8O00217 210 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 PDE2AO00408 941 aaPredicted RBP9.11□□□□□ -0.95
VPS13D-212ENST00000543766 RAB3DO95716 219 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 ASGR1P07306 291 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 GNAO1P09471 354 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 PRKCAP17252 672 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 KCNA5P22460 613 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 STAT1P42224 750 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 DPP6P42658 865 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 FMR1Q06787 632 aaKnown RBP eCLIP9.11□□□□□ -0.95
VPS13D-212ENST00000543766 ZNF177Q13360 481 aaPredicted RBP9.11□□□□□ -0.95
VPS13D-212ENST00000543766 TARBP2Q15633 366 aaKnown RBP9.11□□□□□ -0.95
VPS13D-212ENST00000543766 NSMFQ6X4W1 530 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 MPP5Q8N3R9 675 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 C11orf65Q8NCR3 313 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 OR10Z1Q8NGY1 313 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 FAM227BQ96M60 508 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 DIABLOQ9NR28 239 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 INTS10Q9NVR2 710 aaKnown RBP9.11□□□□□ -0.95
VPS13D-212ENST00000543766 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.11□□□□□ -0.95
VPS13D-212ENST00000543766 AASSQ9UDR5 926 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 NR2E1Q9Y466 385 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 POTEB3A0JP26 581 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 BLACEA4D250 179 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 ZNF233A6NK53 670 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 A8MUA0 341 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 NPIPA7E9PJI5 369 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 NPIPA8P0DM63 369 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 GRIK1P39086 918 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 NRG1Q02297 640 aaPredicted RBP9.11□□□□□ -0.95
VPS13D-212ENST00000543766 DBPQ10586 325 aaPredicted RBP9.11□□□□□ -0.95
VPS13D-212ENST00000543766 ZNF268Q14587 947 aaPredicted RBP9.11□□□□□ -0.95
VPS13D-212ENST00000543766 UAP1L1Q3KQV9 507 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 PLEKHG4Q58EX7 1191 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 RRAGBQ5VZM2 374 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 SULT6B1Q6IMI4 303 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 POTEBQ6S5H4 581 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 NXPE4Q6UWF7 544 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 RRAGAQ7L523 313 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 LRRC20Q8TCA0 184 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 ADAMTS16Q8TE57 1224 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 NAT14Q8WUY8 206 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 IFT43Q96FT9 208 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 ADPGKQ9BRR6 497 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 TARS2Q9BW92 718 aaKnown RBP9.11□□□□□ -0.95
VPS13D-212ENST00000543766 TGIF2Q9GZN2 237 aa9.11□□□□□ -0.95
VPS13D-212ENST00000543766 CCDC86Q9H6F5 360 aaKnown RBP9.11□□□□□ -0.95
VPS13D-212ENST00000543766 HEATR9A2RTY3 570 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 LINC00587B1AMM8 73 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 MED24O75448 989 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 SCO1O75880 301 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 A1BGP04217 495 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 FDPSP14324 419 aaKnown RBP9.1□□□□□ -0.95
VPS13D-212ENST00000543766 ZNF280AP59817 542 aaPredicted RBP9.1□□□□□ -0.95
VPS13D-212ENST00000543766 PIN1Q13526 163 aaPredicted RBP9.1□□□□□ -0.95
VPS13D-212ENST00000543766 ALKBH1Q13686 389 aaKnown RBP9.1□□□□□ -0.95
VPS13D-212ENST00000543766 MORC3Q14149 939 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 MANEAQ5SRI9 462 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 CACHD1Q5VU97 1274 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 OR52E8Q6IFG1 317 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 TTI2Q6NXR4 508 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 EMBQ6PCB8 327 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 CMIPQ8IY22 773 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 ZNF786Q8N393 782 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 SPATA4Q8NEY3 305 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 PXYLP1Q8TE99 480 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 PTCD3Q96EY7 689 aaKnown RBP9.1□□□□□ -0.95
VPS13D-212ENST00000543766 NUDCD1Q96RS6 583 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 ERVMER34-1Q9H9K5 563 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 SLC12A6Q9UHW9 1150 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 TRMT6Q9UJA5 497 aaKnown RBP9.1□□□□□ -0.95
VPS13D-212ENST00000543766 RPH3ALQ9UNE2 315 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 ANKRD6Q9Y2G4 727 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 RFX7Q2KHR2 1363 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 A0A1B0GWJ7 208 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 FAM47DPA6NHR8 397 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 CLN5O75503 358 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 HAUS5O94927 633 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 GDF11O95390 407 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 EGFRP00533 1210 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 PRKCBP05771 671 aa9.1□□□□□ -0.95
VPS13D-212ENST00000543766 ERVK-21P61565 698 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms