RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 AAK1Q2M2I8 961 aa8.21□□□□□ -1.1
TRIM59-208ENST00000543469 MFSD7Q6UXD7 560 aa8.21□□□□□ -1.1
TRIM59-208ENST00000543469 PLCD3Q8N3E9 789 aa8.21□□□□□ -1.1
TRIM59-208ENST00000543469 FAM71BQ8TC56 605 aa8.21□□□□□ -1.1
TRIM59-208ENST00000543469 NKD2Q969F2 451 aaPredicted RBP8.21□□□□□ -1.1
TRIM59-208ENST00000543469 SYT11Q9BT88 431 aa8.21□□□□□ -1.1
TRIM59-208ENST00000543469 TTLL2Q9BWV7 592 aa8.21□□□□□ -1.1
TRIM59-208ENST00000543469 PARD6BQ9BYG5 372 aa8.21□□□□□ -1.1
TRIM59-208ENST00000543469 PPARGC1AQ9UBK2 798 aaKnown RBP8.21□□□□□ -1.1
TRIM59-208ENST00000543469 UBA2Q9UBT2 640 aaPredicted RBP8.21□□□□□ -1.1
TRIM59-208ENST00000543469 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.21□□□□□ -1.1
TRIM59-208ENST00000543469 BCLAF3A2AJT9 711 aaKnown RBP8.21□□□□□ -1.1
TRIM59-208ENST00000543469 KCNU1A8MYU2 1149 aa8.21□□□□□ -1.1
TRIM59-208ENST00000543469 CHADO15335 359 aa8.21□□□□□ -1.1
TRIM59-208ENST00000543469 GAD2Q05329 585 aa8.21□□□□□ -1.1
TRIM59-208ENST00000543469 KRT71Q3SY84 523 aa8.21□□□□□ -1.1
TRIM59-208ENST00000543469 SETD3Q86TU7 594 aaPredicted RBP8.21□□□□□ -1.1
TRIM59-208ENST00000543469 VPS45Q9NRW7 570 aa8.21□□□□□ -1.1
TRIM59-208ENST00000543469 A0A1W2PPC1 479 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 GRM6O15303 877 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 DDX3YO15523 660 aaKnown RBP8.2□□□□□ -1.1
TRIM59-208ENST00000543469 LRCH4O75427 683 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 SYN1P17600 705 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 TACR2P21452 398 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 CCNCP24863 283 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 OR1E1P30953 314 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 HADHAP40939 763 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 POLR2LP62875 67 aaKnown RBP8.2□□□□□ -1.1
TRIM59-208ENST00000543469 HTRA4P83105 476 aaPredicted RBP8.2□□□□□ -1.1
TRIM59-208ENST00000543469 SMTNL2Q2TAL5 461 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 ZC3H12AQ5D1E8 599 aaKnown RBP8.2□□□□□ -1.1
TRIM59-208ENST00000543469 SUGP1Q8IWZ8 645 aaKnown RBP8.2□□□□□ -1.1
TRIM59-208ENST00000543469 CARNMT1Q8N4J0 409 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 ACTL9Q8TC94 416 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 GPR62Q9BZJ7 368 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 VPS28Q9UK41 221 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.2□□□□□ -1.1
TRIM59-208ENST00000543469 E2F8A0AVK6 867 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 ZNF263O14978 683 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 ATP2C2O75185 946 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 POLR2EP19388 210 aaKnown RBP8.2□□□□□ -1.1
TRIM59-208ENST00000543469 FSHRP23945 695 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 CNTFP26441 200 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 VPS41P49754 854 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 PMS2P54278 862 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 BBS9Q3SYG4 887 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 RAB41Q5JT25 222 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 ZDHHC20Q5W0Z9 365 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 SCARA3Q6AZY7 606 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 LIMS2Q7Z4I7 341 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 ZC3H18Q86VM9 953 aaKnown RBP8.2□□□□□ -1.1
TRIM59-208ENST00000543469 LMNTD2Q8IXW0 634 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 CMASQ8NFW8 434 aaPredicted RBP8.2□□□□□ -1.1
TRIM59-208ENST00000543469 JOSD2Q8TAC2 188 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 ARNTL2Q8WYA1 636 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 PSMG2Q969U7 264 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 TSPAN17Q96FV3 270 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 PPP1R16AQ96I34 528 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 BTBD6Q96KE9 485 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 SLC2A11Q9BYW1 496 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 ZBP1Q9H171 429 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 PPANQ9NQ55 473 aaKnown RBP8.2□□□□□ -1.1
TRIM59-208ENST00000543469 MAN1C1Q9NR34 630 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 RBM12Q9NTZ6 932 aaKnown RBP8.2□□□□□ -1.1
TRIM59-208ENST00000543469 HMGXB4Q9UGU5 601 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 SNX24Q9Y343 169 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 DUSP10Q9Y6W6 482 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 A0A0A0MRY4 1105 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 HMGB1P1B2RPK0 211 aaPredicted RBP8.2□□□□□ -1.1
TRIM59-208ENST00000543469 NPC1O15118 1278 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 PAGE1O75459 146 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 PYGMP11217 842 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 CYP2A6P11509 494 aaPredicted RBP8.2□□□□□ -1.1
TRIM59-208ENST00000543469 ERVK-21P61565 698 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 MRPL58Q14197 206 aaKnown RBP8.2□□□□□ -1.1
TRIM59-208ENST00000543469 HIC1Q14526 733 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 STARD3Q14849 445 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 NOMO1Q15155 1222 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 TAC4Q86UU9 113 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 MFN1Q8IWA4 741 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 SPATA13Q96N96 652 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 POLR1EQ9GZS1 481 aaKnown RBP8.2□□□□□ -1.1
TRIM59-208ENST00000543469 ATP13A1Q9HD20 1204 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 SAYSD1Q9NPB0 183 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 SCUBE2Q9NQ36 999 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 OGFRQ9NZT2 677 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 PLA2G4CQ9UP65 541 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 NAALADL1Q9UQQ1 740 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 TRIM43BA6NCK2 446 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 CRTAMO95727 393 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 SERPINF2P08697 491 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 KRT15P19012 456 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 MPP3Q13368 585 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 RTN4RL1Q86UN2 441 aaPredicted RBP8.2□□□□□ -1.1
TRIM59-208ENST00000543469 CTAGE3PQ8IX95 158 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 RTL3Q8N8U3 475 aaKnown RBP8.2□□□□□ -1.1
TRIM59-208ENST00000543469 COG1Q8WTW3 980 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 TRIM43Q96BQ3 446 aaPredicted RBP8.2□□□□□ -1.1
TRIM59-208ENST00000543469 CABS1Q96KC9 395 aa8.2□□□□□ -1.1
TRIM59-208ENST00000543469 CYTH2Q99418 400 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms