RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 CACTINQ8WUQ7 758 aaKnown RBP5.02□□□□□ -1.61
LIMS1-214ENST00000542845 RFFLQ8WZ73 363 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 POMGNT1Q8WZA1 660 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 SGF29Q96ES7 293 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 ATXN7L3BQ96GX2 97 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 SERAC1Q96JX3 654 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 C8orf48Q96LL4 319 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 SLC46A1Q96NT5 459 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 KCNK16Q96T55 309 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 DUSP9Q99956 384 aaKnown RBP5.02□□□□□ -1.61
LIMS1-214ENST00000542845 FAM213AQ9BRX8 229 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 SLC25A18Q9H1K4 315 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 EPN3Q9H201 632 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 IKZF4Q9H2S9 585 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 SNX25Q9H3E2 840 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 SYNDIG1Q9H7V2 258 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 SGK2Q9HBY8 427 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 PDRG1Q9NUG6 133 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 LARSQ9P2J5 1176 aaKnown RBP5.02□□□□□ -1.61
LIMS1-214ENST00000542845 NUDT5Q9UKK9 219 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 PLA2G4CQ9UP65 541 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 C2CD2Q9Y426 696 aa5.02□□□□□ -1.61
LIMS1-214ENST00000542845 UTP20O75691 2785 aaKnown RBP5.02□□□□□ -1.61
LIMS1-214ENST00000542845 UBR5O95071 2799 aaPredicted RBP5.02□□□□□ -1.61
LIMS1-214ENST00000542845 MYO9AB2RTY4 2548 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 A0A1B0GVM2 712 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 A1L4Q6 167 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 CPED1A4D0V7 1026 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 GOLGA8IPA6NC78 632 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 GOLGA8JA6NMD2 632 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 TLR4O00206 839 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 GABRDO14764 452 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 NPC1O15118 1278 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 MDM4O15151 490 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 FZD6O60353 706 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 TLR5O60602 858 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 RNASEH2AO75792 299 aaKnown RBP5.01□□□□□ -1.61
LIMS1-214ENST00000542845 CLSTN1O94985 981 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 AGFG2O95081 481 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 IL18RAPO95256 599 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 KRT18P05783 430 aaKnown RBP5.01□□□□□ -1.61
LIMS1-214ENST00000542845 TMEM191BP0C7N4 346 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 FDPSP14324 419 aaKnown RBP5.01□□□□□ -1.61
LIMS1-214ENST00000542845 PTPN1P18031 435 aaKnown RBP5.01□□□□□ -1.61
LIMS1-214ENST00000542845 GUCY2CP25092 1073 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 COL8A1P27658 744 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 ATP5C1P36542 298 aaKnown RBP5.01□□□□□ -1.61
LIMS1-214ENST00000542845 GNL1P36915 607 aaPredicted RBP5.01□□□□□ -1.61
LIMS1-214ENST00000542845 RPIAP49247 311 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 PGFP49763 221 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 GALCP54803 685 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 MFAP3P55082 362 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 RBP5P82980 135 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 GRIN1Q05586 938 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 GOLGA8FQ08AF8 430 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 GOLGA8DPQ0D2H9 430 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 GNL2Q13823 731 aaKnown RBP5.01□□□□□ -1.61
LIMS1-214ENST00000542845 TBR1Q16650 682 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 POM121L1PQ3SYA9 428 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 TTC31Q49AM3 519 aaPredicted RBP5.01□□□□□ -1.61
LIMS1-214ENST00000542845 NCEH1Q6PIU2 408 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 CRTC1Q6UUV9 634 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 XKR5Q6UX68 686 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 ANKS1BQ7Z6G8 1248 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 SKAP1Q86WV1 359 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 ARL14Q8N4G2 192 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 TOP6BLQ8N6T0 577 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 NECAB1Q8N987 351 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 C1orf127Q8N9H9 656 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 MYCBPAPQ8TBZ2 947 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 DDI1Q8WTU0 396 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 EDEM1Q92611 657 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 JAKMIP2Q96AA8 810 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 ARRDC3Q96B67 414 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 SAAL1Q96ER3 474 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 PRR11Q96HE9 360 aaPredicted RBP5.01□□□□□ -1.61
LIMS1-214ENST00000542845 HPDLQ96IR7 371 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 CDK5RAP3Q96JB5 506 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 CITED4Q96RK1 184 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 OMDQ99983 421 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 ORAI3Q9BRQ5 295 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 C2orf49Q9BVC5 232 aaPredicted RBP5.01□□□□□ -1.61
LIMS1-214ENST00000542845 TIPINQ9BVW5 301 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 KLF16Q9BXK1 252 aaPredicted RBP5.01□□□□□ -1.61
LIMS1-214ENST00000542845 BACH2Q9BYV9 841 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 RAB34Q9BZG1 259 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 ZNF518BQ9C0D4 1074 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 NIF3L1Q9GZT8 377 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 NEUROG2Q9H2A3 272 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 MTG2Q9H4K7 406 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 CAAP1Q9H8G2 361 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.01□□□□□ -1.61
LIMS1-214ENST00000542845 TMEM30AQ9NV96 361 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 FBXL12Q9NXK8 326 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 CLEC4EQ9ULY5 219 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 PLAAQ9Y263 795 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 WASF2Q9Y6W5 498 aa5.01□□□□□ -1.61
LIMS1-214ENST00000542845 AHCTF1Q8WYP5 2266 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 CREBBPQ92793 2442 aa5□□□□□ -1.61
LIMS1-214ENST00000542845 TBC1D3DA0A087WVF3 549 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms