RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 TP53INP2Q8IXH6 220 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 TDHQ8IZJ6 230 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 CCDC33Q8N5R6 958 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 NPWQ8N729 165 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 ATP6V0D2Q8N8Y2 350 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 NETO2Q8NC67 525 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 LRRN4Q8WUT4 740 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 BTN2A3PQ96KV6 586 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 C1orf74Q96LT6 269 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 CORO1BQ9BR76 489 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 TMEM121Q9BTD3 319 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 TRIM31Q9BZY9 425 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 KLC2Q9H0B6 622 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 RAB17Q9H0T7 212 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 GKN1Q9NS71 199 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 UTP11Q9Y3A2 253 aaKnown RBP13.69□□□□□ -0.22
CHFR-221ENST00000542714 CHD5Q8TDI0 1954 aa13.69□□□□□ -0.22
CHFR-221ENST00000542714 GOLGA6L7A0A1B0GV03 622 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 CCDC151A5D8V7 595 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 RFXAPO00287 272 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 MOSPD3O75425 235 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 STC2O76061 302 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 GAS8O95995 478 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 KRT14P02533 472 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 POU2F2P09086 479 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 SRGAP2BP0DMP2 458 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 MYL4P12829 197 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 MCM3P25205 808 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 EPHB2P29323 1055 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 HTR7P34969 479 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 DRG2P55039 364 aaKnown RBP13.68□□□□□ -0.22
CHFR-221ENST00000542714 AUHQ13825 339 aaKnown RBP13.68□□□□□ -0.22
CHFR-221ENST00000542714 PPP1R7Q15435 360 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 DUSP6Q16828 381 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 RAP1GAP2Q684P5 730 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 NUGGCQ68CJ6 796 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 TXNDC8Q6A555 127 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 ZDHHC24Q6UX98 284 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 RBM23Q86U06 439 aaKnown RBP13.68□□□□□ -0.22
CHFR-221ENST00000542714 ELMOD1Q8N336 334 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 VN1R2Q8NFZ6 395 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 ADAMTS19Q8TE59 1207 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 AENQ8WTP8 325 aaKnown RBP13.68□□□□□ -0.22
CHFR-221ENST00000542714 IFT81Q8WYA0 676 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 PLD4Q96BZ4 506 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 ZNF707Q96C28 371 aaPredicted RBP13.68□□□□□ -0.22
CHFR-221ENST00000542714 TBC1D31Q96DN5 1066 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 MYEOVQ96EZ4 313 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 QKIQ96PU8 341 aaKnown RBP eCLIP13.68□□□□□ -0.22
CHFR-221ENST00000542714 CYP2S1Q96SQ9 504 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 PRO3102Q9H379 93 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 USP29Q9HBJ7 922 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 TRPC7Q9HCX4 862 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 DNMT3BQ9UBC3 853 aaKnown RBP13.68□□□□□ -0.22
CHFR-221ENST00000542714 FEZ2Q9UHY8 353 aaPredicted RBP13.68□□□□□ -0.22
CHFR-221ENST00000542714 NFU1Q9UMS0 254 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 SNX24Q9Y343 169 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 HCFC2Q9Y5Z7 792 aa13.68□□□□□ -0.22
CHFR-221ENST00000542714 NUP210Q8TEM1 1887 aaPredicted RBP13.67□□□□□ -0.22
CHFR-221ENST00000542714 CHD9Q3L8U1 2897 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 IGLV3-10A0A075B6K4 115 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 A0A1W2PRU2 124 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 BCLAF3A2AJT9 711 aaKnown RBP13.67□□□□□ -0.22
CHFR-221ENST00000542714 H7C0C1 242 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 TP73O15350 636 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 SEC31AO94979 1220 aaKnown RBP13.67□□□□□ -0.22
CHFR-221ENST00000542714 KLKB1P03952 638 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 HNRNPA1P09651 372 aaKnown RBP eCLIP13.67□□□□□ -0.22
CHFR-221ENST00000542714 ZSCAN5DPP0CG00 497 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 MBL2P11226 248 aaPredicted RBP13.67□□□□□ -0.22
CHFR-221ENST00000542714 VAV1P15498 845 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 GJA1P17302 382 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 CDC25CP30307 473 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 SLC6A4P31645 630 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 ATP5OP48047 213 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 NRLP54845 237 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 ZXDBP98169 803 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 LMNB2Q03252 620 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 XRCC4Q13426 336 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 CUL1Q13616 776 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 KCNC3Q14003 757 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 PABPC1LQ4VXU2 614 aaKnown RBP13.67□□□□□ -0.22
CHFR-221ENST00000542714 FAM133BQ5BKY9 247 aaKnown RBP13.67□□□□□ -0.22
CHFR-221ENST00000542714 STXBP5Q5T5C0 1151 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 DARS2Q6PI48 645 aaKnown RBP13.67□□□□□ -0.22
CHFR-221ENST00000542714 TMCO3Q6UWJ1 677 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 NLRP14Q86W24 1093 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 ARL14EPQ8N8R7 260 aaPredicted RBP13.67□□□□□ -0.22
CHFR-221ENST00000542714 FAM71DQ8N9W8 422 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 SHKBP1Q8TBC3 707 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 HNRNPLLQ8WVV9 542 aaKnown RBP13.67□□□□□ -0.22
CHFR-221ENST00000542714 MRPS31Q92665 395 aaKnown RBP13.67□□□□□ -0.22
CHFR-221ENST00000542714 IGSF8Q969P0 613 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 TCEAL4Q96EI5 215 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 NACA2Q9H009 215 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 SLC28A3Q9HAS3 691 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 PCDH9Q9HC56 1237 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 ASAH2Q9NR71 780 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 FAM114A2Q9NRY5 505 aa13.67□□□□□ -0.22
CHFR-221ENST00000542714 ZDHHC18Q9NUE0 388 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms