RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 GFAPP14136 432 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 NFKB1P19838 968 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 GAD2Q05329 585 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 FAAP100Q0VG06 881 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 OLIG2Q13516 323 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 MARCH8Q5T0T0 291 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 DUPD1Q68J44 220 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 FUT10Q6P4F1 479 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 MAMDC4Q6UXC1 1216 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 OTOP3Q7RTS5 596 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 STRA8Q7Z7C7 330 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 C7orf61Q8IZ16 206 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 ZNF473Q8WTR7 871 aaKnown RBP10.42□□□□□ -0.74
TOP3A-208ENST00000542570 TMA16Q96EY4 203 aaKnown RBP10.42□□□□□ -0.74
TOP3A-208ENST00000542570 FGD4Q96M96 766 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 MRPL17Q9NRX2 175 aaKnown RBP10.42□□□□□ -0.74
TOP3A-208ENST00000542570 CYTH4Q9UIA0 394 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 XPO1O14980 1071 aaKnown RBP10.42□□□□□ -0.74
TOP3A-208ENST00000542570 FAM155BO75949 473 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 SYF2O95926 243 aaKnown RBP10.42□□□□□ -0.74
TOP3A-208ENST00000542570 ESRRAP11474 423 aaPredicted RBP10.42□□□□□ -0.74
TOP3A-208ENST00000542570 AKT1P31749 480 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 RPL9P32969 192 aaKnown RBP10.42□□□□□ -0.74
TOP3A-208ENST00000542570 ATP5C1P36542 298 aaKnown RBP10.42□□□□□ -0.74
TOP3A-208ENST00000542570 ALDH18A1P54886 795 aaKnown RBP10.42□□□□□ -0.74
TOP3A-208ENST00000542570 ELAVL2Q12926 359 aaKnown RBP10.42□□□□□ -0.74
TOP3A-208ENST00000542570 LINGO4Q6UY18 593 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 DDX1Q92499 740 aaKnown RBP10.42□□□□□ -0.74
TOP3A-208ENST00000542570 CSPG4P5Q96PW8 444 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 TMBIM4Q9HC24 238 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 CRYL1Q9Y2S2 319 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 MYH7BA7E2Y1 1941 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 SCN7AQ01118 1682 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 BRWD3Q6RI45 1802 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 A0A0U1RQF3 1178 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 ARVCFO00192 962 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 NDUFS3O75489 264 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 OXCT1P55809 520 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 MORF4L2Q15014 288 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 USP41Q3LFD5 358 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 ARID3BQ8IVW6 561 aaPredicted RBP10.42□□□□□ -0.74
TOP3A-208ENST00000542570 TOP6BLQ8N6T0 577 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 PLD5Q8N7P1 536 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 LPCAT1Q8NF37 534 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 SPATA22Q8NHS9 363 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 DQX1Q8TE96 717 aaKnown RBP10.42□□□□□ -0.74
TOP3A-208ENST00000542570 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.42□□□□□ -0.745e-7■■■■■ 39
TOP3A-208ENST00000542570 ABCC13Q9NSE7 274 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 ETNK2Q9NVF9 386 aa10.42□□□□□ -0.74
TOP3A-208ENST00000542570 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.42□□□□□ -0.74
TOP3A-208ENST00000542570 LRP5O75197 1615 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 CIB2O75838 187 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 CREB1P16220 341 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 GABRR2P28476 465 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 CDKN2BP42772 138 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 NAPEPLDQ6IQ20 393 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 CLEC20AQ6ZU45 233 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 BBS12Q6ZW61 710 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 YAF2Q8IY57 180 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 PGBD3Q8N328 593 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 ING5Q8WYH8 240 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 P2RY11Q96G91 374 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 LHX5Q9H2C1 402 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 ADAMTS10Q9H324 1103 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 BPIFA1Q9NP55 256 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 SLC30A1Q9Y6M5 507 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 POLR2AP24928 1970 aaKnown RBP10.41□□□□□ -0.74
TOP3A-208ENST00000542570 PAPPAQ13219 1627 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 C2CD4BA6NLJ0 364 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 EIF3HO15372 352 aaKnown RBP eCLIP10.41□□□□□ -0.747e-7■□□□□ 9.9
TOP3A-208ENST00000542570 STX7O15400 261 aaKnown RBP10.41□□□□□ -0.74
TOP3A-208ENST00000542570 PHGDHO43175 533 aaKnown RBP10.41□□□□□ -0.74
TOP3A-208ENST00000542570 MFSD11O43934 449 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 GPR32O75388 356 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 SLC2A3P11169 496 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 GRIA1P42261 906 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 CXCR3P49682 368 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 PEX5P50542 639 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 PAPOLAP51003 745 aaKnown RBP10.41□□□□□ -0.74
TOP3A-208ENST00000542570 ARFIP2P53365 341 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 RHOAP61586 193 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 PLIN5Q00G26 463 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 CHI3L2Q15782 390 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 TRIM68Q6AZZ1 485 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 WDTC1Q8N5D0 677 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 SMG8Q8ND04 991 aaKnown RBP10.41□□□□□ -0.74
TOP3A-208ENST00000542570 GIMAP7Q8NHV1 300 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 GNEQ9Y223 722 aaKnown RBP10.41□□□□□ -0.74
TOP3A-208ENST00000542570 N4BP2Q86UW6 1770 aaPredicted RBP10.41□□□□□ -0.74
TOP3A-208ENST00000542570 LRIG2O94898 1065 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 FECHP22830 423 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 SGO1Q5FBB7 561 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 INTS6LQ5JSJ4 861 aaKnown RBP10.41□□□□□ -0.74
TOP3A-208ENST00000542570 KLC3Q6P597 504 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 FRA10AC1Q70Z53 315 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 TAC4Q86UU9 113 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 WDR75Q8IWA0 830 aaKnown RBP10.41□□□□□ -0.74
TOP3A-208ENST00000542570 TRPV1Q8NER1 839 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 PCDH19Q8TAB3 1148 aa10.41□□□□□ -0.74
TOP3A-208ENST00000542570 SERPINB11Q96P15 392 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms