RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 AUHQ13825 339 aaKnown RBP10.08□□□□□ -0.8
YBX3-212ENST00000542002 PPP2R5DQ14738 602 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 ASIC2Q16515 512 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 C15orf59Q2T9L4 293 aaPredicted RBP10.08□□□□□ -0.8
YBX3-212ENST00000542002 PPP1R15BQ5SWA1 713 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 MPP7Q5T2T1 576 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 KIAA1211LQ6NV74 962 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 FBXL22Q6P050 247 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 ARCQ7LC44 396 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 WDR5BQ86VZ2 330 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 LONP2Q86WA8 852 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 CIR1Q86X95 450 aaPredicted RBP10.08□□□□□ -0.8
YBX3-212ENST00000542002 ZNF683Q8IZ20 524 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 MCOLN2Q8IZK6 566 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 LGI2Q8N0V4 545 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 CAMKK1Q8N5S9 505 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 KCNV2Q8TDN2 545 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 RXFP2Q8WXD0 754 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 NKD2Q969F2 451 aaPredicted RBP10.08□□□□□ -0.8
YBX3-212ENST00000542002 FAM126AQ9BYI3 521 aaPredicted RBP10.08□□□□□ -0.8
YBX3-212ENST00000542002 SLC2A11Q9BYW1 496 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 TKTL2Q9H0I9 626 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 METTL5Q9NRN9 209 aaKnown RBP10.08□□□□□ -0.8
YBX3-212ENST00000542002 ABCB8Q9NUT2 735 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 ELOVL2Q9NXB9 296 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 ARHGEF38Q9NXL2 777 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 CACNA2D2Q9NY47 1150 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 EBF1Q9UH73 591 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 INTS6Q9UL03 887 aaKnown RBP10.08□□□□□ -0.8
YBX3-212ENST00000542002 CAPN11Q9UMQ6 739 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 INVSQ9Y283 1065 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 RAD54BQ9Y620 910 aa10.08□□□□□ -0.8
YBX3-212ENST00000542002 A0A1W2PQJ5 194 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 SIGLEC16A6NMB1 481 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 DCLK1O15075 740 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 GFRA3O60609 400 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 APOEP02649 317 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 PDGFRAP16234 1089 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 ABCB4P21439 1286 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 RRM1P23921 792 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 NTSR1P30989 418 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 IL12RB1P42701 662 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 NUMBP49757 651 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 GSCP56915 257 aaPredicted RBP10.07□□□□□ -0.8
YBX3-212ENST00000542002 RPL7AP62424 266 aaKnown RBP10.07□□□□□ -0.8
YBX3-212ENST00000542002 ATP11AP98196 1134 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 OGDHQ02218 1023 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 DEUP1Q05D60 604 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 LMAN2Q12907 356 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 ENPP2Q13822 863 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 LPAL2Q16609 132 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 PTPRNQ16849 979 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 PREPLQ4J6C6 727 aaPredicted RBP10.07□□□□□ -0.8
YBX3-212ENST00000542002 WDR59Q6PJI9 974 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 RASSF3Q86WH2 238 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 GAS2L3Q86XJ1 694 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 DCLK2Q8N568 766 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.07□□□□□ -0.8
YBX3-212ENST00000542002 ATP6V0D2Q8N8Y2 350 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 MDGA1Q8NFP4 955 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 OR52K2Q8NGK3 314 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 CCDC26Q8TAB7 109 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 FIBINQ8TAL6 211 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 CYB5D2Q8WUJ1 264 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 CENPIQ92674 756 aaPredicted RBP10.07□□□□□ -0.8
YBX3-212ENST00000542002 RNF34Q969K3 372 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 ACDQ96AP0 544 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 GABRG3Q99928 467 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 NUP58Q9BVL2 599 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 SIK2Q9H0K1 926 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 SLC6A17Q9H1V8 727 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 EPC1Q9H2F5 836 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 WDCPQ9H6R7 721 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 RRN3Q9NYV6 651 aa10.07□□□□□ -0.8
YBX3-212ENST00000542002 THAP10Q9P2Z0 257 aaPredicted RBP10.07□□□□□ -0.8
YBX3-212ENST00000542002 ATG2BQ96BY7 2078 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 CCDC163A0A0D9SF12 145 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 AXIN1O15169 862 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 CNTN5O94779 1100 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 APBB3O95704 486 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 LMNAP02545 664 aaKnown RBP10.06□□□□□ -0.8
YBX3-212ENST00000542002 FTLP02792 175 aaPredicted RBP10.06□□□□□ -0.8
YBX3-212ENST00000542002 CCDC172P0C7W6 258 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 SLC2A3P11169 496 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 KRT3P12035 628 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 CASP14P31944 242 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 CTSOP43234 321 aaPredicted RBP10.06□□□□□ -0.8
YBX3-212ENST00000542002 DGKEP52429 567 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 HDAC4P56524 1084 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 ZBED6P86452 979 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 KLHL30Q0D2K2 578 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 MAMLD1Q13495 774 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 FUT11Q495W5 492 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 C5orf22Q49AR2 442 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 HSF5Q4G112 596 aaPredicted RBP10.06□□□□□ -0.8
YBX3-212ENST00000542002 EOGTQ5NDL2 527 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 ANO7Q6IWH7 933 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 ZC3H14Q6PJT7 736 aaKnown RBP10.06□□□□□ -0.8
YBX3-212ENST00000542002 CHST9Q7L1S5 443 aa10.06□□□□□ -0.8
YBX3-212ENST00000542002 ANKS1BQ7Z6G8 1248 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms