RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 PSTPIP1O43586 416 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 PRPSAP2O60256 369 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 HSF2BPO75031 334 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 MOCS2O96007 188 aaPredicted RBP8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 URODP06132 367 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 CNPP09543 421 aaKnown RBP8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 PECAM1P16284 738 aaPredicted RBP8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 LAG3P18627 525 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 CDKN2BP42772 138 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 SLC1A1P43005 524 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 YWHAGP61981 247 aaKnown RBP eCLIP8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 HTRA4P83105 476 aaPredicted RBP8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 TAP1Q03518 808 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 GPR17Q13304 367 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 ODF2Q5BJF6 829 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 EFHC1Q5JVL4 640 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 SYCP2LQ5T4T6 812 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 RASIP1Q5U651 963 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 C8orf74Q6P047 294 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 SPOCD1Q6ZMY3 1216 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 TMC7Q7Z402 723 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 MIB1Q86YT6 1006 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 TP53INP2Q8IXH6 220 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 KATNAL2Q8IYT4 538 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 GLIS1Q8NBF1 620 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 ST13P5Q8NFI4 369 aaPredicted RBP8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 CASP10Q92851 521 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 C11orf84Q9BUA3 381 aaPredicted RBP8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 OSBPL8Q9BZF1 889 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 DPH5Q9H2P9 285 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 CCSER2Q9H7U1 834 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 FAM204AQ9H8W3 233 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 NEUROD4Q9HD90 331 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 MED4Q9NPJ6 270 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 LCMT1Q9UIC8 334 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 INSL6Q9Y581 213 aa8.02□□□□□ -1.13
AC005840.3-201ENST00000541888 MYO18AQ92614 2054 aaKnown RBP8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 hCG_1818297A0A087WSY0 165 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 OR6C75A6NL08 312 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 PER2O15055 1255 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 CREB3O43889 395 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 DAB1O75553 588 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 HEXIM1O94992 359 aaKnown RBP8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 ARAFP10398 606 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 ETS1P14921 441 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 GOT1P17174 413 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 GJA1P17302 382 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 KDELR1P24390 212 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 MAN1A1P33908 653 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 DSG1Q02413 1049 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 GUCY2DQ02846 1103 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 DEUP1Q05D60 604 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 TAF10Q12962 218 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 PLD1Q13393 1074 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 DPYSL3Q14195 570 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 MAPRE1Q15691 268 aaKnown RBP8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 SLC25A52Q3SY17 297 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 PPP1R2P3Q6NXS1 205 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 PSRC1Q6PGN9 363 aaPredicted RBP8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 C1orf228Q6PIY5 440 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 DENND5BQ6ZUT9 1274 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 RBM23Q86U06 439 aaKnown RBP8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 RFX6Q8HWS3 928 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 NUP93Q8N1F7 819 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 FNIP1Q8TF40 1166 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 PIK3R5Q8WYR1 880 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 HERVK_113Q902F9 699 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 FBXO32Q969P5 355 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 MAGOHBQ96A72 148 aaKnown RBP8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 NPY6RQ99463 290 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 RAD9AQ99638 391 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 TCF25Q9BQ70 676 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 TACO1Q9BSH4 297 aaKnown RBP8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 DDX23Q9BUQ8 820 aaKnown RBP8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 DNAI2Q9GZS0 605 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 CNGB3Q9NQW8 809 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 ETNK2Q9NVF9 386 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 AP4E1Q9UPM8 1137 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 YBX2Q9Y2T7 364 aaKnown RBP8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 PCDHB12Q9Y5F1 795 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 GPC6Q9Y625 555 aaPredicted RBP8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 ARHGEF37A1IGU5 675 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 SLC38A8A6NNN8 435 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 F5H423 210 aaPredicted RBP8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 H3BQF6 201 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 RFXAPO00287 272 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 PRRG1O14668 218 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 GRM6O15303 877 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 CST8O60676 142 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 CXCL14O95715 111 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 FAM163BP0C2L3 166 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 ZSCAN5DPP0CG00 497 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 HAPLN1P10915 354 aaPredicted RBP8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 TWF1Q12792 350 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 EFEMP1Q12805 493 aa8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 ELAVL2Q12926 359 aaKnown RBP8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 KLF1Q13351 362 aaPredicted RBP8.01□□□□□ -1.13
AC005840.3-201ENST00000541888 MTM1Q13496 603 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms