RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 LATO43561 262 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 ADH1BP00325 375 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 TNNC2P02585 160 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 TGM2P21980 687 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 SLC6A4P31645 630 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 DCTP40126 519 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 ATP1A2P50993 1020 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 HNRNPKP61978 463 aaKnown RBP eCLIP9.9□□□□□ -0.82
YBX3-211ENST00000541351 SEPT6Q14141 434 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 CST6Q15828 149 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 ZNF787Q6DD87 383 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 CPXM2Q8N436 756 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 IGSF22Q8N9C0 903 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 GALNT11Q8NCW6 608 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 FAM174AQ8TBP5 190 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 KBTBD7Q8WVZ9 684 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 SORCS1Q8WY21 1168 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 WBP2Q969T9 261 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 ARRDC3Q96B67 414 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 TMEM159Q96B96 161 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 MED10Q9BTT4 135 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 NEUROG2Q9H2A3 272 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 EBF2Q9HAK2 575 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 EXOC7Q9UPT5 735 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 STYXL1Q9Y6J8 313 aa9.9□□□□□ -0.82
YBX3-211ENST00000541351 UTP20O75691 2785 aaKnown RBP9.89□□□□□ -0.83
YBX3-211ENST00000541351 RP1L1Q8IWN7 2480 aaPredicted RBP9.89□□□□□ -0.83
YBX3-211ENST00000541351 MYH11P35749 1972 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 A0A1W2PQ27 194 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 A0A1W2PQ64 194 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 A0A1W2PQC6 194 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 A1L4Q6 167 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 CPED1A4D0V7 1026 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 H3BM21 787 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 HCRTO43612 131 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 NOBOXO60393 691 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 RTN2O75298 545 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 TBCAO75347 108 aaKnown RBP9.89□□□□□ -0.83
YBX3-211ENST00000541351 TACC1O75410 805 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 PIAS2O75928 621 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 PRPF6O94906 941 aaKnown RBP9.89□□□□□ -0.83
YBX3-211ENST00000541351 RALAP11233 206 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 GOT1P17174 413 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 POLR2EP19388 210 aaKnown RBP9.89□□□□□ -0.83
YBX3-211ENST00000541351 GTF2BQ00403 316 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 KCNJ12Q14500 433 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 SURF1Q15526 300 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 ZNF174Q15697 407 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 MPPE1Q53F39 396 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 C10orf120Q5SQS8 335 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 TMEM164Q5U3C3 297 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 CHST9Q7L1S5 443 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 RAB11FIP2Q7L804 512 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 EFL1Q7Z2Z2 1120 aaKnown RBP9.89□□□□□ -0.83
YBX3-211ENST00000541351 LIMS2Q7Z4I7 341 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 BRSK2Q8IWQ3 736 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 RBBP8NLQ8NC74 664 aaPredicted RBP9.89□□□□□ -0.83
YBX3-211ENST00000541351 B3GALNT2Q8NCR0 500 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 SCAMP5Q8TAC9 235 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 HVCN1Q96D96 273 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 TNIP3Q96KP6 325 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 ZNF518BQ9C0D4 1074 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 RUBCNLQ9H714 662 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 RBAKQ9NYW8 714 aaPredicted RBP9.89□□□□□ -0.83
YBX3-211ENST00000541351 NOL7Q9UMY1 257 aaKnown RBP9.89□□□□□ -0.83
YBX3-211ENST00000541351 PLXNA2O75051 1894 aa9.89□□□□□ -0.83
YBX3-211ENST00000541351 BSNQ9UPA5 3926 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 A0A1W2PNU3 283 aaPredicted RBP9.88□□□□□ -0.83
YBX3-211ENST00000541351 TARSL2A2RTX5 802 aaKnown RBP9.88□□□□□ -0.83
YBX3-211ENST00000541351 EME2A4GXA9 379 aaPredicted RBP9.88□□□□□ -0.83
YBX3-211ENST00000541351 A8MXQ7 604 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 WNT7AO00755 349 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 MID1O15344 667 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 CAPN5O15484 640 aaPredicted RBP9.88□□□□□ -0.83
YBX3-211ENST00000541351 C5AR1P21730 350 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 UGT1A5P35504 534 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 ADPRHP54922 357 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 TNNC1P63316 161 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 KCNMA1Q12791 1236 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 DHX8Q14562 1220 aaKnown RBP9.88□□□□□ -0.83
YBX3-211ENST00000541351 NR0B2Q15466 257 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 TGIF1Q15583 401 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 ZRSR1Q15695 479 aaKnown RBP9.88□□□□□ -0.83
YBX3-211ENST00000541351 CDKN3Q16667 212 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 LACTB2Q53H82 288 aaPredicted RBP9.88□□□□□ -0.83
YBX3-211ENST00000541351 TTC38Q5R3I4 469 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 SLC39A4Q6P5W5 647 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 DCP2Q8IU60 420 aaKnown RBP9.88□□□□□ -0.83
YBX3-211ENST00000541351 ZNF366Q8N895 744 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 TEX19Q8NA77 164 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 GPBAR1Q8TDU6 330 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 CYB5D2Q8WUJ1 264 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 TMEM74Q96NL1 305 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 SALL4Q9UJQ4 1053 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 STRIP2Q9ULQ0 834 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 CSNK1G3Q9Y6M4 447 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 LRRK1Q38SD2 2015 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 F8P00451 2351 aa9.88□□□□□ -0.83
YBX3-211ENST00000541351 SETD2Q9BYW2 2564 aaPredicted RBP9.87□□□□□ -0.83
YBX3-211ENST00000541351 LRBAP50851 2863 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms