RNA–Protein interactions for RNA: ENST00000541216.1

RAP1B-224, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAP1B, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-224ENST00000541216 TRAPPC12Q8WVT3 735 aa4.93□□□□□ -1.62
RAP1B-224ENST00000541216 CELF1Q92879 486 aaKnown RBP4.93□□□□□ -1.62
RAP1B-224ENST00000541216 REXO5Q96IC2 774 aaKnown RBP4.93□□□□□ -1.62
RAP1B-224ENST00000541216 FCRL5Q96RD9 977 aa4.93□□□□□ -1.62
RAP1B-224ENST00000541216 SENP7Q9BQF6 1050 aa4.93□□□□□ -1.62
RAP1B-224ENST00000541216 PRSS22Q9GZN4 317 aa4.93□□□□□ -1.62
RAP1B-224ENST00000541216 ABHD16BQ9H3Z7 469 aa4.93□□□□□ -1.62
RAP1B-224ENST00000541216 SRP68Q9UHB9 627 aaKnown RBP4.93□□□□□ -1.62
RAP1B-224ENST00000541216 RAB21Q9UL25 225 aa4.93□□□□□ -1.62
RAP1B-224ENST00000541216 TRPC5Q9UL62 973 aaPredicted RBP4.93□□□□□ -1.62
RAP1B-224ENST00000541216 MAFFQ9ULX9 164 aa4.93□□□□□ -1.62
RAP1B-224ENST00000541216 C19orf53Q9UNZ5 99 aaPredicted RBP4.93□□□□□ -1.62
RAP1B-224ENST00000541216 HEMK1Q9Y5R4 338 aaPredicted RBP4.93□□□□□ -1.62
RAP1B-224ENST00000541216 CYP3A7-CYP3A51PA0A087WV96 503 aa4.92□□□□□ -1.62
RAP1B-224ENST00000541216 hCG_1642624A0A1W2PR95 340 aa4.92□□□□□ -1.62
RAP1B-224ENST00000541216 TTC34A8MYJ7 566 aa4.92□□□□□ -1.62
RAP1B-224ENST00000541216 PIP5K1CO60331 668 aa4.92□□□□□ -1.62
RAP1B-224ENST00000541216 NBNO60934 754 aa4.92□□□□□ -1.62
RAP1B-224ENST00000541216 HEXIM1O94992 359 aaKnown RBP4.92□□□□□ -1.62
RAP1B-224ENST00000541216 PRR35P0CG20 571 aa4.92□□□□□ -1.62
RAP1B-224ENST00000541216 CYP3A7P24462 503 aa4.92□□□□□ -1.62
RAP1B-224ENST00000541216 CST5P28325 142 aaPredicted RBP4.92□□□□□ -1.62
RAP1B-224ENST00000541216 HOXA7P31268 230 aaPredicted RBP4.92□□□□□ -1.62
RAP1B-224ENST00000541216 RBM6P78332 1123 aaKnown RBP4.92□□□□□ -1.62
RAP1B-224ENST00000541216 ZNF268Q14587 947 aaPredicted RBP4.92□□□□□ -1.62
RAP1B-224ENST00000541216 PDCD2Q16342 344 aaPredicted RBP4.92□□□□□ -1.62
RAP1B-224ENST00000541216 GALNTL6Q49A17 601 aa4.92□□□□□ -1.62
RAP1B-224ENST00000541216 WDR93Q6P2C0 686 aa4.92□□□□□ -1.62
RAP1B-224ENST00000541216 ZNF474Q6S9Z5 364 aaPredicted RBP4.92□□□□□ -1.62
RAP1B-224ENST00000541216 SLC39A5Q6ZMH5 540 aa4.92□□□□□ -1.62
RAP1B-224ENST00000541216 RBM44Q6ZP01 1051 aaKnown RBP4.92□□□□□ -1.62
RAP1B-224ENST00000541216 CLEC4CQ8WTT0 213 aa4.92□□□□□ -1.62
RAP1B-224ENST00000541216 HMGB4Q8WW32 186 aa4.92□□□□□ -1.62
RAP1B-224ENST00000541216 GPR78Q96P69 363 aa4.92□□□□□ -1.62
RAP1B-224ENST00000541216 SLC12A4Q9UP95 1085 aa4.92□□□□□ -1.62
RAP1B-224ENST00000541216 MBD3L5A6NJ08 208 aaPredicted RBP4.91□□□□□ -1.62
RAP1B-224ENST00000541216 FAM155BO75949 473 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 RNF8O76064 485 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 PLAUP00749 431 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 SLC3A2P08195 630 aaKnown RBP4.91□□□□□ -1.62
RAP1B-224ENST00000541216 KELP23276 732 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 KRTAP5-9P26371 169 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 TACR3P29371 465 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 ARHGAP25P42331 645 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 SLC37A1P57057 533 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 POSTNQ15063 836 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 FAM110CQ1W6H9 321 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 ZNF626Q68DY1 528 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 KRTAP5-4Q6L8H1 288 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 MIS18BP1Q6P0N0 1132 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 UBE2Q1Q7Z7E8 422 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 ADGRF3Q8IZF5 1079 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 NPAS1Q99742 590 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 FAM118BQ9BPY3 351 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 LIN7CQ9NUP9 197 aaKnown RBP4.91□□□□□ -1.62
RAP1B-224ENST00000541216 ARL8BQ9NVJ2 186 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 BTBD3Q9Y2F9 522 aa4.91□□□□□ -1.62
RAP1B-224ENST00000541216 SLC22A23A1A5C7 686 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 FAM90A20PA6NIJ5 464 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 C2CD4BA6NLJ0 364 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 EFCAB8A8MWE9 144 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 E5RJQ4 531 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 H0Y3Z8 333 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 DSCR3O14972 297 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 INPPL1O15357 1258 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 CNTN5O94779 1100 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 SGPL1O95470 568 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 IGKV2-30P06310 120 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 RPS6KB1P23443 525 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 GRK5P34947 590 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 PTGER1P34995 402 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 PRKAA2P54646 552 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 HSF1Q00613 529 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 EARS2Q5JPH6 523 aaKnown RBP4.9□□□□□ -1.63
RAP1B-224ENST00000541216 ZNF569Q5MCW4 686 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 SLC2A7Q6PXP3 512 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 RHPN2Q8IUC4 686 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 CCDC117Q8IWD4 279 aaPredicted RBP4.9□□□□□ -1.63
RAP1B-224ENST00000541216 SUGP1Q8IWZ8 645 aaKnown RBP4.9□□□□□ -1.63
RAP1B-224ENST00000541216 SLC2A12Q8TD20 617 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 ATP2A3Q93084 1043 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 TWSG1Q9GZX9 223 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 ELAC1Q9H777 363 aaKnown RBP4.9□□□□□ -1.63
RAP1B-224ENST00000541216 RCE1Q9Y256 329 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 COPG1Q9Y678 874 aaKnown RBP4.9□□□□□ -1.63
RAP1B-224ENST00000541216 MORC2Q9Y6X9 1032 aaPredicted RBP4.9□□□□□ -1.63
RAP1B-224ENST00000541216 ZNF804BA4D1E1 1349 aa4.9□□□□□ -1.63
RAP1B-224ENST00000541216 C3orf70A6NLC5 250 aaPredicted RBP4.89□□□□□ -1.63
RAP1B-224ENST00000541216 ALDOAP04075 364 aaKnown RBP4.89□□□□□ -1.63
RAP1B-224ENST00000541216 ENO1P06733 434 aaKnown RBP4.89□□□□□ -1.63
RAP1B-224ENST00000541216 ST6GAL1P15907 406 aa4.89□□□□□ -1.63
RAP1B-224ENST00000541216 HALP42357 657 aa4.89□□□□□ -1.63
RAP1B-224ENST00000541216 SHC2P98077 582 aa4.89□□□□□ -1.63
RAP1B-224ENST00000541216 DCTN1Q14203 1278 aa4.89□□□□□ -1.63
RAP1B-224ENST00000541216 EZH2Q15910 746 aaKnown RBP4.89□□□□□ -1.63
RAP1B-224ENST00000541216 TIGD6Q17RP2 521 aa4.89□□□□□ -1.63
RAP1B-224ENST00000541216 TBRG1Q3YBR2 411 aa4.89□□□□□ -1.63
RAP1B-224ENST00000541216 MTX3Q5HYI7 312 aa4.89□□□□□ -1.63
RAP1B-224ENST00000541216 MORN5Q5VZ52 161 aa4.89□□□□□ -1.63
RAP1B-224ENST00000541216 ANO1Q5XXA6 986 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms