RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 DTLQ9NZJ0 730 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 ZNF180Q9UJW8 692 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 PCDHA11Q9Y5I1 949 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 SF3B1O75533 1304 aaKnown RBP eCLIP10.65□□□□□ -0.79e-7■■■■■ 35.8
CDC42SE1-207ENST00000540998 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 C15orf38-AP3S2A0A0A6YYH1 394 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 ZNF195O14628 629 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 PEX1O43933 1283 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 ITGA2BP08514 1039 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 CCDC130P13994 396 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 MPSTP25325 297 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 ADORA2BP29275 332 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 EPHA3P29320 983 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 TYK2P29597 1187 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 SDC4P31431 198 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 GLRBP48167 497 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 NUDT2P50583 147 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 SOWAHAQ2M3V2 549 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 EFCAB12Q6NXP0 572 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 PPP1R2P3Q6NXS1 205 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 OLFML1Q6UWY5 402 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 ARPINQ7Z6K5 226 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 CTU1Q7Z7A3 348 aaKnown RBP10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 SULF1Q8IWU6 871 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 FBXO16Q8IX29 292 aaPredicted RBP10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 PIP4K2CQ8TBX8 421 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 FCRL3Q96P31 734 aaPredicted RBP10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 GRIP2Q9C0E4 1043 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 KLHL4Q9C0H6 718 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 MTMR10Q9NXD2 777 aa10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 PPP1R1BQ9UD71 204 aaPredicted RBP10.65□□□□□ -0.7
CDC42SE1-207ENST00000540998 PARP14Q460N5 1801 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 A0A087WZ62 844 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 MFSD11O43934 449 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 SPAG6O75602 509 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 UQCRBP14927 111 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 MAGEA3P43357 314 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 TMEM62Q0P6H9 643 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 TTLL12Q14166 644 aaPredicted RBP10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 GSTA3Q16772 222 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 SLC10A6Q3KNW5 377 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 FAM47CQ5HY64 1035 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 C6orf52Q5T4I8 152 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 XRRA1Q6P2D8 792 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 ACAD11Q709F0 780 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 SPATA24Q86W54 205 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 CCNYQ8ND76 341 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 ZSCAN18Q8TBC5 510 aaPredicted RBP10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 NAT14Q8WUY8 206 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 ZFAND2BQ8WV99 257 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 ARNTL2Q8WYA1 636 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 MPP4Q96JB8 637 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 FDXACB1Q9BRP7 624 aaPredicted RBP10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 UBP1Q9NZI7 540 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 SNX9Q9Y5X1 595 aa10.65□□□□□ -0.71
CDC42SE1-207ENST00000540998 SIP14410 1827 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 CITO14578 2027 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 IGKV6D-21A0A0A0MT36 114 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 B4GALT4O60513 344 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 IL1BP01584 269 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 RALBP11234 206 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 XRCC1P18887 633 aaPredicted RBP10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 RPL10P27635 214 aaKnown RBP10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 PMLP29590 882 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 GABRB2P47870 512 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 PDK1Q15118 436 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 WDR78Q5VTH9 848 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 HEATR6Q6AI08 1181 aaKnown RBP10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 SLC9A4Q6AI14 798 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 KYAT3Q6YP21 454 aaKnown RBP10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 TMC7Q7Z402 723 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 ST13P4Q8IZP2 240 aaPredicted RBP10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 METTL25Q8N6Q8 603 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 FRMD8P1Q9BZ68 369 aaPredicted RBP10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 COPS7BQ9H9Q2 264 aaPredicted RBP10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 GBA2Q9HCG7 927 aaPredicted RBP10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 PDGFCQ9NRA1 345 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 MOCS1Q9NZB8 636 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 NOP56O00567 594 aaKnown RBP10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 NDC80O14777 642 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 TRPA1O75762 1119 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 SMIM18P0DKX4 95 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 TSHRP16473 764 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 TPH1P17752 444 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 FGFR3P22607 806 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 PROZP22891 400 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 AVPR1AP37288 418 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 EFNA5P52803 228 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 THOP1P52888 689 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 MBTD1Q05BQ5 628 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 ZNF618Q5T7W0 954 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 SNX32Q86XE0 403 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 TRIM42Q8IWZ5 723 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 COLGALT1Q8NBJ5 622 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 CSPG4P5Q96PW8 444 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 COPG2Q9UBF2 871 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 HESX1Q9UBX0 185 aa10.64□□□□□ -0.71
CDC42SE1-207ENST00000540998 AP4E1Q9UPM8 1137 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms