RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.9■□□□□ 0.37e-6■■■□□ 14.7
TRIM65-203ENST00000540812 PLA2G4CQ9UP65 541 aa16.9■□□□□ 0.3
TRIM65-203ENST00000540812 CER1O95813 267 aa16.89■□□□□ 0.29
TRIM65-203ENST00000540812 DLDP09622 509 aaKnown RBP16.89■□□□□ 0.29
TRIM65-203ENST00000540812 ZNF883P0CG24 379 aa16.89■□□□□ 0.29
TRIM65-203ENST00000540812 HOXB3P14651 431 aaPredicted RBP16.89■□□□□ 0.29
TRIM65-203ENST00000540812 CD44P16070 742 aaKnown RBP16.89■□□□□ 0.29
TRIM65-203ENST00000540812 CSNK1EP49674 416 aaKnown RBP16.89■□□□□ 0.29
TRIM65-203ENST00000540812 SCAPQ12770 1279 aa16.89■□□□□ 0.29
TRIM65-203ENST00000540812 CNGA2Q16280 664 aa16.89■□□□□ 0.29
TRIM65-203ENST00000540812 ISM2Q6H9L7 571 aa16.89■□□□□ 0.29
TRIM65-203ENST00000540812 GLRX5Q86SX6 157 aa16.89■□□□□ 0.29
TRIM65-203ENST00000540812 PPM1KQ8N3J5 372 aa16.89■□□□□ 0.29
TRIM65-203ENST00000540812 LMO3Q8TAP4 145 aa16.89■□□□□ 0.29
TRIM65-203ENST00000540812 IRGQQ8WZA9 623 aa16.89■□□□□ 0.29
TRIM65-203ENST00000540812 LMLNQ96KR4 655 aa16.89■□□□□ 0.29
TRIM65-203ENST00000540812 PCED1AQ9H1Q7 454 aa16.89■□□□□ 0.29
TRIM65-203ENST00000540812 STIM2Q9P246 746 aa16.89■□□□□ 0.29
TRIM65-203ENST00000540812 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.89■□□□□ 0.29
TRIM65-203ENST00000540812 SMG1Q96Q15 3661 aaKnown RBP16.88■□□□□ 0.29
TRIM65-203ENST00000540812 PMM2O15305 246 aa16.88■□□□□ 0.29
TRIM65-203ENST00000540812 ACSL4O60488 711 aa16.88■□□□□ 0.29
TRIM65-203ENST00000540812 SEMA4FO95754 770 aa16.88■□□□□ 0.29
TRIM65-203ENST00000540812 LTFP02788 710 aa16.88■□□□□ 0.29
TRIM65-203ENST00000540812 FYNP06241 537 aa16.88■□□□□ 0.29
TRIM65-203ENST00000540812 TBX4P57082 545 aa16.88■□□□□ 0.29
TRIM65-203ENST00000540812 KIF19Q2TAC6 998 aa16.88■□□□□ 0.29
TRIM65-203ENST00000540812 NUGGCQ68CJ6 796 aa16.88■□□□□ 0.29
TRIM65-203ENST00000540812 IL27RAQ6UWB1 636 aa16.88■□□□□ 0.29
TRIM65-203ENST00000540812 LAYNQ6UX15 382 aa16.88■□□□□ 0.29
TRIM65-203ENST00000540812 RRAGAQ7L523 313 aa16.88■□□□□ 0.29
TRIM65-203ENST00000540812 MYO19Q96H55 970 aa16.88■□□□□ 0.29
TRIM65-203ENST00000540812 PRICKLE1Q96MT3 831 aaPredicted RBP16.88■□□□□ 0.29
TRIM65-203ENST00000540812 MIS12Q9H081 205 aa16.88■□□□□ 0.29
TRIM65-203ENST00000540812 METTL14Q9HCE5 456 aaKnown RBP16.88■□□□□ 0.29
TRIM65-203ENST00000540812 SNX11Q9Y5W9 270 aa16.88■□□□□ 0.29
TRIM65-203ENST00000540812 NBEAQ8NFP9 2946 aa16.88■□□□□ 0.29
TRIM65-203ENST00000540812 ATP5BP06576 529 aaKnown RBP16.87■□□□□ 0.29
TRIM65-203ENST00000540812 POLR2EP19388 210 aaKnown RBP16.87■□□□□ 0.29
TRIM65-203ENST00000540812 SLC11A2P49281 568 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 AFF3P51826 1226 aaKnown RBP16.87■□□□□ 0.29
TRIM65-203ENST00000540812 RPS24P62847 133 aaKnown RBP16.87■□□□□ 0.29
TRIM65-203ENST00000540812 RING1Q06587 406 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 CCDC40Q4G0X9 1142 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 MPP7Q5T2T1 576 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 CCNI2Q6ZMN8 369 aaPredicted RBP16.87■□□□□ 0.29
TRIM65-203ENST00000540812 DBX2Q6ZNG2 339 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 ARHGEF19Q8IW93 802 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 MFN1Q8IWA4 741 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 UNC45BQ8IWX7 931 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 BAHD1Q8TBE0 780 aaPredicted RBP16.87■□□□□ 0.29
TRIM65-203ENST00000540812 BIRC7Q96CA5 298 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 FCRL2Q96LA5 508 aaPredicted RBP16.87■□□□□ 0.29
TRIM65-203ENST00000540812 HSFY1Q96LI6 401 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 CEP63Q96MT8 703 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 ORAI3Q9BRQ5 295 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 BTBD1Q9H0C5 482 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 NUCKS1Q9H1E3 243 aaKnown RBP16.87■□□□□ 0.29
TRIM65-203ENST00000540812 FBRSQ9HAH7 460 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 TM9SF3Q9HD45 589 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 TOR4AQ9NXH8 423 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 MAN1B1Q9UKM7 699 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 INTS6Q9UL03 887 aaKnown RBP16.87■□□□□ 0.29
TRIM65-203ENST00000540812 APOBEC2Q9Y235 224 aaKnown RBP16.87■□□□□ 0.29
TRIM65-203ENST00000540812 BTBD3Q9Y2F9 522 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 ITPR1Q14643 2758 aa16.87■□□□□ 0.29
TRIM65-203ENST00000540812 PLXNB3Q9ULL4 1909 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 APC2O95996 2303 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 GOLGA6L4A6NEF3 574 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 KCNK3O14649 394 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 PSMA7O14818 248 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 IRAK2O43187 625 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 FSBPO95073 299 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 DNTTP04053 509 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 CSKP41240 450 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 ZBTB16Q05516 673 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 STILQ15468 1287 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 KCNT1Q5JUK3 1230 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 MMS22LQ6ZRQ5 1243 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 PROSER1Q86XN7 944 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 HJURPQ8NCD3 748 aaPredicted RBP16.86■□□□□ 0.29
TRIM65-203ENST00000540812 DQX1Q8TE96 717 aaKnown RBP16.86■□□□□ 0.29
TRIM65-203ENST00000540812 AZIN2Q96A70 460 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 TTC17Q96AE7 1141 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 DHTKD1Q96HY7 919 aaPredicted RBP16.86■□□□□ 0.29
TRIM65-203ENST00000540812 MRGPRX3Q96LB0 322 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 SUN2Q9UH99 717 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 ANKRD6Q9Y2G4 727 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 PCDHGB2Q9Y5G2 931 aa16.86■□□□□ 0.29
TRIM65-203ENST00000540812 FBXO21O94952 628 aa16.85■□□□□ 0.29
TRIM65-203ENST00000540812 ATXN1LP0C7T5 689 aaKnown RBP16.85■□□□□ 0.29
TRIM65-203ENST00000540812 TTC31Q49AM3 519 aaPredicted RBP16.85■□□□□ 0.29
TRIM65-203ENST00000540812 FSCBQ5H9T9 825 aa16.85■□□□□ 0.29
TRIM65-203ENST00000540812 ZNF776Q68DI1 518 aaPredicted RBP16.85■□□□□ 0.29
TRIM65-203ENST00000540812 KLHL10Q6JEL2 608 aa16.85■□□□□ 0.29
TRIM65-203ENST00000540812 TTI2Q6NXR4 508 aa16.85■□□□□ 0.29
TRIM65-203ENST00000540812 MARCH9Q86YJ5 346 aa16.85■□□□□ 0.29
TRIM65-203ENST00000540812 CFAP52Q8N1V2 620 aa16.85■□□□□ 0.29
TRIM65-203ENST00000540812 CARNMT1Q8N4J0 409 aa16.85■□□□□ 0.29
TRIM65-203ENST00000540812 FIBINQ8TAL6 211 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms