RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 MAD1L1Q9Y6D9 718 aa15.3■□□□□ 0.04
TSFM-207ENST00000540550 SHROOM3Q8TF72 1996 aa15.3■□□□□ 0.04
TSFM-207ENST00000540550 OR6C75A6NL08 312 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 PRPF4O43172 522 aaKnown RBP eCLIP15.29■□□□□ 0.04
TSFM-207ENST00000540550 IRAK2O43187 625 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 MTSS1O43312 755 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 PQBP1O60828 265 aaKnown RBP15.29■□□□□ 0.04
TSFM-207ENST00000540550 IGLV3-25P01717 112 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 AMHP03971 560 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 INHBAP08476 426 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 MPP2Q14168 576 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 PARP6Q2NL67 630 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 ZNF534Q76KX8 674 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 SRLQ86TD4 932 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 C4orf33Q8N1A6 199 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 AGGF1Q8N302 714 aaeCLIP15.29■□□□□ 0.04
TSFM-207ENST00000540550 CKAP2Q8WWK9 683 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 SEC16BQ96JE7 1060 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 C8orf48Q96LL4 319 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 CASD1Q96PB1 797 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 CEP41Q9BYV8 373 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 ARHGEF38Q9NXL2 777 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 KLHL8Q9P2G9 620 aaPredicted RBP15.29■□□□□ 0.04
TSFM-207ENST00000540550 FAM169AQ9Y6X4 670 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 SCN5AQ14524 2016 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 IQANK1A0A1B0GTG1 560 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 A0A1W2PQH9 124 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 TRDMT1O14717 391 aaKnown RBP15.29■□□□□ 0.04
TSFM-207ENST00000540550 LRIG2O94898 1065 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 MYCP01106 439 aaPredicted RBP15.29■□□□□ 0.04
TSFM-207ENST00000540550 ALDH2P05091 517 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 CCR1P32246 355 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 MAGEA3P43357 314 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 MAGEA11P43364 429 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 GATMP50440 423 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 IL9RQ01113 521 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 PPIDQ08752 370 aaKnown RBP15.29■□□□□ 0.04
TSFM-207ENST00000540550 WASHC5Q12768 1159 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 KBTBD12Q3ZCT8 623 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 RWDD4Q6NW29 188 aaKnown RBP15.29■□□□□ 0.04
TSFM-207ENST00000540550 ZNF567Q8N184 647 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 NUP93Q8N1F7 819 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 ARHGAP18Q8N392 663 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 DEFB118Q96PH6 123 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 EBNA1BP2Q99848 306 aaKnown RBP15.29■□□□□ 0.04
TSFM-207ENST00000540550 MRPL9Q9BYD2 267 aaKnown RBP15.29■□□□□ 0.04
TSFM-207ENST00000540550 FBXO44Q9H4M3 255 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 KIF9Q9HAQ2 790 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 SAMD15Q9P1V8 674 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 TTLL3Q9Y4R7 772 aa15.29■□□□□ 0.04
TSFM-207ENST00000540550 ATXN2Q99700 1313 aaKnown RBP15.28■□□□□ 0.04
TSFM-207ENST00000540550 PIAS1O75925 651 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 MLNP12872 115 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 PSMB4P28070 264 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 SLC18A1P54219 525 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 COG7P83436 770 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 GALNT2Q10471 571 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 GPNMBQ14956 572 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 DDR2Q16832 855 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 PID1Q7Z2X4 250 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 SCD5Q86SK9 330 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 NPAS4Q8IUM7 802 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 TP53INP2Q8IXH6 220 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 NPWQ8N729 165 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 PDCD7Q8N8D1 485 aaKnown RBP15.28■□□□□ 0.04
TSFM-207ENST00000540550 SLC44A1Q8WWI5 657 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 PGLYRP2Q96PD5 576 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 HAPLN3Q96S86 360 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 PAIP2Q9BPZ3 127 aaKnown RBP15.28■□□□□ 0.04
TSFM-207ENST00000540550 SIK2Q9H0K1 926 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 SSU72Q9NP77 194 aaKnown RBP15.28■□□□□ 0.04
TSFM-207ENST00000540550 TMEM51Q9NW97 253 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 IGSF9Q9P2J2 1179 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 SFMBT1Q9UHJ3 866 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 SCML2Q9UQR0 700 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 TTC3P53804 2025 aa15.28■□□□□ 0.04
TSFM-207ENST00000540550 A0A1W2PPM1 405 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 TCP11X1B4DZS4 312 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 APOEP02649 317 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 SRGAP2BP0DMP2 458 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 CPB1P15086 417 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 CA4P22748 312 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 PTPN3P26045 913 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 HTR7P34969 479 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 SLC11A1P49279 550 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 ARPP19P56211 112 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 ELAVL2Q12926 359 aaKnown RBP15.27■□□□□ 0.04
TSFM-207ENST00000540550 SDHAF4Q5VUM1 108 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 MON1AQ86VX9 555 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 CTAGE3PQ8IX95 158 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 GSDMBQ8TAX9 411 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 CASP10Q92851 521 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 HDAC11Q96DB2 347 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 STAMBPL1Q96FJ0 436 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 CABS1Q96KC9 395 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 SIGLEC10Q96LC7 697 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 MAGEB18Q96M61 343 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 SERPINB11Q96P15 392 aa15.27■□□□□ 0.04
TSFM-207ENST00000540550 FNDC1Q4ZHG4 1894 aaPredicted RBP15.27■□□□□ 0.03
TSFM-207ENST00000540550 KCNK1O00180 336 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms