RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 SYAP1Q96A49 352 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 MMS19Q96T76 1030 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 PCED1AQ9H1Q7 454 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 APOBEC3GQ9HC16 384 aaKnown RBP9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 ABCB6Q9NP58 842 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 CD93Q9NPY3 652 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.32□□□□□ -0.922e-12■■■■■ 298.1
TRAPPC1-202ENST00000540486 USP36Q9P275 1121 aaKnown RBP9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 ARMCX3Q9UH62 379 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 GTF3C4Q9UKN8 822 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 ANKRD6Q9Y2G4 727 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 COQ4Q9Y3A0 265 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 R3HCC1Q9Y3T6 440 aaKnown RBP9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 PAXBP1Q9Y5B6 917 aa9.32□□□□□ -0.92
TRAPPC1-202ENST00000540486 K7ENP7 123 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 GLDCP23378 1020 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 ERCC5P28715 1186 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 GNL1P36915 607 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 GRIA4P48058 902 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 LHX1P48742 406 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 GPR15P49685 360 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 ACADVLP49748 655 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 ZNF132P52740 706 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 ERVPABLB-1P60509 514 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 DDR2Q16832 855 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 ZNF667Q5HYK9 610 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 INTS6LQ5JSJ4 861 aaKnown RBP9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 C10orf76Q5T2E6 689 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 TCERG1LQ5VWI1 586 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 INO80CQ6PI98 192 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 KIAA1324Q6UXG2 1013 aaKnown RBP9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 MIB1Q86YT6 1006 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 TRIM59Q8IWR1 403 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 ETFBKMTQ8IXQ9 262 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 OR6B3Q8NGW1 331 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 RFFLQ8WZ73 363 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 TAF4BQ92750 862 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 OTUB2Q96DC9 234 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 CNDP2Q96KP4 475 aaKnown RBP9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 NUP58Q9BVL2 599 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 SMYD3Q9H7B4 428 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 METTL14Q9HCE5 456 aaKnown RBP9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 CRTAC1Q9NQ79 661 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 STARD5Q9NSY2 213 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 RAB20Q9NX57 234 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 HCN2Q9UL51 889 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 SRPK3Q9UPE1 567 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 CLCA2Q9UQC9 943 aa9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 USP9YO00507 2555 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC1-202ENST00000540486 RELNP78509 3460 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 H0Y8X5 98 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 PMM2O15305 246 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 KLK10O43240 276 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 HOXC11O43248 304 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 TULP3O75386 442 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 GNA14O95837 355 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 MYF5P13349 255 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 KRT10P13645 584 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 ASPAP45381 313 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 FMO5P49326 533 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 TNNC1P63316 161 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 MYL7Q01449 175 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 TSPY1Q01534 308 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 ORC1Q13415 861 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 ZNF699Q32M78 642 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 CCDC40Q4G0X9 1142 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 DCAF17Q5H9S7 520 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 CT47A1Q5JQC4 288 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 LY6G5CQ5SRR4 150 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 CCDC183Q5T5S1 534 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 SDHAF4Q5VUM1 108 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 EGFLAMQ63HQ2 1017 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 DDX42Q86XP3 938 aaKnown RBP eCLIP9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 DCBLD1Q8N8Z6 715 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 STKLD1Q8NE28 680 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 FBXL13Q8NEE6 735 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 LMO3Q8TAP4 145 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 PSMG3-AS1Q96PY0 264 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 ACOX2Q99424 681 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 SLC6A17Q9H1V8 727 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 DPEP3Q9H4B8 488 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 CDH9Q9ULB4 789 aa9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 FCF1Q9Y324 198 aaKnown RBP9.3□□□□□ -0.92
TRAPPC1-202ENST00000540486 CLEC18AA5D8T8 446 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 A8MXQ7 604 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 KCNK3O14649 394 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 STX10O60499 249 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 IGLV3-19P01714 112 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 SFTPCP11686 197 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 PTPN1P18031 435 aaKnown RBP9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 CYP2F1P24903 491 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 PCSK1P29120 753 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 PIK3CAP42336 1068 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 CTSKP43235 329 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 PPP3CCP48454 512 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 MXI1P50539 228 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 TPMTP51580 245 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 INHBCP55103 352 aa9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 PSMC1P62191 440 aaKnown RBP9.29□□□□□ -0.92
TRAPPC1-202ENST00000540486 NOP14P78316 857 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms