RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 PHTF2Q8N3S3 785 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 DQX1Q8TE96 717 aaKnown RBP11.88□□□□□ -0.51
TMEM258-205ENST00000540434 ATP2A3Q93084 1043 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 SPAG5Q96R06 1193 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 XPO4Q9C0E2 1151 aaKnown RBP11.88□□□□□ -0.51
TMEM258-205ENST00000540434 RAB6CQ9H0N0 254 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 PLK2Q9NYY3 685 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 EVLQ9UI08 416 aaPredicted RBP11.88□□□□□ -0.51
TMEM258-205ENST00000540434 XPO7Q9UIA9 1087 aaKnown RBP11.88□□□□□ -0.51
TMEM258-205ENST00000540434 SH3BP1Q9Y3L3 701 aa11.88□□□□□ -0.51
TMEM258-205ENST00000540434 URB1O60287 2271 aaKnown RBP11.88□□□□□ -0.51
TMEM258-205ENST00000540434 MYO18AQ92614 2054 aaKnown RBP11.87□□□□□ -0.51
TMEM258-205ENST00000540434 A0A1W2PQC6 194 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 LRRC53A6NM62 1247 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 UPK3BL1B0FP48 263 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 UPK3BL2E5RIL1 263 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 H0Y626 953 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 K7EQS6 105 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 GFRA2O00451 464 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 FBXO21O94952 628 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 TRIM16O95361 564 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 IGLV3-25P01717 112 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 IGLV3-27P01718 113 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 SKILP12757 684 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 UNGP13051 313 aaPredicted RBP11.87□□□□□ -0.51
TMEM258-205ENST00000540434 NCAM1P13591 858 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 DRD1P21728 446 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 ACADSBP45954 432 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 GABRB2P47870 512 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 UBASH3AP57075 661 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 ZNF445P59923 1031 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 DMC1Q14565 340 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 EMC10Q5UCC4 262 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 NADSYN1Q6IA69 706 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 CCNI2Q6ZMN8 369 aaPredicted RBP11.87□□□□□ -0.51
TMEM258-205ENST00000540434 TPGS1Q6ZTW0 290 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 RSRC2Q7L4I2 434 aaKnown RBP11.87□□□□□ -0.51
TMEM258-205ENST00000540434 TAC4Q86UU9 113 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 XYLT1Q86Y38 959 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 ETFBKMTQ8IXQ9 262 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 DEFB106AQ8N104 65 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 CPA6Q8N4T0 437 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 FRMD1Q8N878 549 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 RPLP0P6Q8NHW5 317 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 BHMTQ93088 406 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 FAM149B1Q96BN6 582 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 SLC39A13Q96H72 371 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 FCRL2Q96LA5 508 aaPredicted RBP11.87□□□□□ -0.51
TMEM258-205ENST00000540434 ZDHHC4Q9NPG8 344 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 SCUBE2Q9NQ36 999 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 ANLNQ9NQW6 1124 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 SPHK2Q9NRA0 654 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 TAS2R14Q9NYV8 317 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 MYO18BQ8IUG5 2567 aa11.87□□□□□ -0.51
TMEM258-205ENST00000540434 I6L893 689 aaPredicted RBP11.86□□□□□ -0.51
TMEM258-205ENST00000540434 TSPAN3O60637 253 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 NFATC1O95644 943 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 SLC6A4P31645 630 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 YWHAZP63104 245 aaKnown RBP11.86□□□□□ -0.51
TMEM258-205ENST00000540434 COG7P83436 770 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 SLC6A3Q01959 620 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 GOLGA8FQ08AF8 430 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 GOLGA8DPQ0D2H9 430 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 FBXO43Q4G163 708 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 FILIP1LQ4L180 1135 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 SMYD5Q6GMV2 418 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 TOGARAM2Q6ZUX3 1019 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 RASSF3Q86WH2 238 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 DDX42Q86XP3 938 aaKnown RBP eCLIP11.86□□□□□ -0.51
TMEM258-205ENST00000540434 ZNF843Q8N446 348 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 KIAA1958Q8N8K9 716 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 TMEM35BQ8NCS4 154 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 RNF139Q8WU17 664 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 CPLX3Q8WVH0 158 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 CD101Q93033 1021 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 SLC2A13Q96QE2 648 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 UBL7Q96S82 380 aaPredicted RBP11.86□□□□□ -0.51
TMEM258-205ENST00000540434 AGPAT1Q99943 283 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 P2RY13Q9BPV8 354 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 GTPBP2Q9BX10 602 aaKnown RBP11.86□□□□□ -0.51
TMEM258-205ENST00000540434 RBSNQ9H1K0 784 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 TBC1D14Q9P2M4 693 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 PCDH15Q96QU1 1955 aa11.86□□□□□ -0.51
TMEM258-205ENST00000540434 GOLGA6L19H0YKK7 550 aa11.85□□□□□ -0.51
TMEM258-205ENST00000540434 SLC9A3R1O14745 358 aaPredicted RBP11.85□□□□□ -0.51
TMEM258-205ENST00000540434 TRUB2O95900 331 aaKnown RBP11.85□□□□□ -0.51
TMEM258-205ENST00000540434 CISD3P0C7P0 127 aa11.85□□□□□ -0.51
TMEM258-205ENST00000540434 ADH5P11766 374 aa11.85□□□□□ -0.51
TMEM258-205ENST00000540434 HNRNPLP14866 589 aaKnown RBP eCLIP11.85□□□□□ -0.51
TMEM258-205ENST00000540434 RDXP35241 583 aaKnown RBP11.85□□□□□ -0.51
TMEM258-205ENST00000540434 RNASE9P60153 205 aaKnown RBP11.85□□□□□ -0.51
TMEM258-205ENST00000540434 KDSRQ06136 332 aa11.85□□□□□ -0.51
TMEM258-205ENST00000540434 CLEC16AQ2KHT3 1053 aa11.85□□□□□ -0.51
TMEM258-205ENST00000540434 ANO4Q32M45 955 aa11.85□□□□□ -0.51
TMEM258-205ENST00000540434 USP39Q53GS9 565 aaKnown RBP11.85□□□□□ -0.51
TMEM258-205ENST00000540434 DCAF6Q58WW2 860 aa11.85□□□□□ -0.51
TMEM258-205ENST00000540434 FAM133BQ5BKY9 247 aaKnown RBP11.85□□□□□ -0.51
TMEM258-205ENST00000540434 ZC3H12AQ5D1E8 599 aaKnown RBP11.85□□□□□ -0.51
TMEM258-205ENST00000540434 ARTNQ5T4W7 220 aa11.85□□□□□ -0.51
TMEM258-205ENST00000540434 FYB2Q5VWT5 728 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms