RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 FRMD1Q8N878 549 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.61■□□□□ 0.09
UBE3B-212ENST00000540230 HJURPQ8NCD3 748 aaPredicted RBP15.61■□□□□ 0.09
UBE3B-212ENST00000540230 HMGB4Q8WW32 186 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 RLN3Q8WXF3 142 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 NT5C3BQ969T7 300 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 LMLNQ96KR4 655 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 CIPCQ9C0C6 399 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 TTYH3Q9C0H2 523 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 SLC6A17Q9H1V8 727 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 POLMQ9NP87 494 aaPredicted RBP15.61■□□□□ 0.09
UBE3B-212ENST00000540230 THAP10Q9P2Z0 257 aaPredicted RBP15.61■□□□□ 0.09
UBE3B-212ENST00000540230 GGA2Q9UJY4 613 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 STON1Q9Y6Q2 735 aa15.61■□□□□ 0.09
UBE3B-212ENST00000540230 CKAP5Q14008 2032 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 A0A1W2PQC6 194 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 LRRC53A6NM62 1247 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 PABPC1P11940 636 aaKnown RBP15.6■□□□□ 0.09
UBE3B-212ENST00000540230 BCKDHBP21953 392 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 CCR1P32246 355 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 GBP1P32455 592 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 IRAK1P51617 712 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 CENPCQ03188 943 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 LMAN2Q12907 356 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 ZNF234Q14588 700 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 CLEC16AQ2KHT3 1053 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 SKOR2Q2VWA4 1001 aaPredicted RBP15.6■□□□□ 0.09
UBE3B-212ENST00000540230 RAB6CQ53S08 254 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 CHST9Q7L1S5 443 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 ADIPOR2Q86V24 386 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 MFN1Q8IWA4 741 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 ATP6V0D2Q8N8Y2 350 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 CYB5D2Q8WUJ1 264 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 RNF34Q969K3 372 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 CFAP57Q96MR6 1250 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 AGPAT1Q99943 283 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 SYT11Q9BT88 431 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 RAB6CQ9H0N0 254 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 PARD6AQ9NPB6 346 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 CD93Q9NPY3 652 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 TMPRSS4Q9NRS4 437 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 RAB23Q9ULC3 237 aa15.6■□□□□ 0.09
UBE3B-212ENST00000540230 ADCY5O95622 1261 aa15.59■□□□□ 0.09
UBE3B-212ENST00000540230 TGM1P22735 817 aa15.59■□□□□ 0.09
UBE3B-212ENST00000540230 PRKCHP24723 683 aa15.59■□□□□ 0.09
UBE3B-212ENST00000540230 NUMBP49757 651 aa15.59■□□□□ 0.09
UBE3B-212ENST00000540230 ENPP2Q13822 863 aa15.59■□□□□ 0.09
UBE3B-212ENST00000540230 EIF4HQ15056 248 aaKnown RBP15.59■□□□□ 0.09
UBE3B-212ENST00000540230 FUT11Q495W5 492 aa15.59■□□□□ 0.09
UBE3B-212ENST00000540230 PLK5Q496M5 336 aa15.59■□□□□ 0.09
UBE3B-212ENST00000540230 LAIR1Q6GTX8 287 aa15.59■□□□□ 0.09
UBE3B-212ENST00000540230 TRIM72Q6ZMU5 477 aa15.59■□□□□ 0.09
UBE3B-212ENST00000540230 BNIPLQ7Z465 357 aa15.59■□□□□ 0.09
UBE3B-212ENST00000540230 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.59■□□□□ 0.09
UBE3B-212ENST00000540230 KIAA2013Q8IYS2 634 aa15.59■□□□□ 0.09
UBE3B-212ENST00000540230 CARNMT1Q8N4J0 409 aa15.59■□□□□ 0.09
UBE3B-212ENST00000540230 MSANTD4Q8NCY6 345 aa15.59■□□□□ 0.09
UBE3B-212ENST00000540230 JOSD2Q8TAC2 188 aa15.59■□□□□ 0.09
UBE3B-212ENST00000540230 DDX50Q9BQ39 737 aaKnown RBP15.59■□□□□ 0.09
UBE3B-212ENST00000540230 IRX2Q9BZI1 471 aaPredicted RBP15.59■□□□□ 0.09
UBE3B-212ENST00000540230 DUSP15Q9H1R2 295 aaPredicted RBP15.59■□□□□ 0.09
UBE3B-212ENST00000540230 SEPT11Q9NVA2 429 aaKnown RBP15.59■□□□□ 0.09
UBE3B-212ENST00000540230 BCCIPQ9P287 314 aaKnown RBP eCLIP15.59■□□□□ 0.09
UBE3B-212ENST00000540230 INTS6Q9UL03 887 aaKnown RBP15.59■□□□□ 0.09
UBE3B-212ENST00000540230 SNX10Q9Y5X0 201 aa15.59■□□□□ 0.09
UBE3B-212ENST00000540230 HS3ST4Q9Y661 456 aa15.59■□□□□ 0.09
UBE3B-212ENST00000540230 PLXND1Q9Y4D7 1925 aa15.59■□□□□ 0.09
UBE3B-212ENST00000540230 PAGE1O75459 146 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 ALDH1A2O94788 518 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 HLA-EP13747 358 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 FERP16591 822 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 NDUFV2P19404 249 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 ABCB4P21439 1286 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 PBX1P40424 430 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 CXCR3P49682 368 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 DEUP1Q05D60 604 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 MAPK8IP2Q13387 824 aaPredicted RBP15.58■□□□□ 0.09
UBE3B-212ENST00000540230 SLC25A52Q3SY17 297 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 MBLAC2Q68D91 279 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 FBXL22Q6P050 247 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 C14orf80Q86SX3 495 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 ZNF366Q8N895 744 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 FIBINQ8TAL6 211 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 WFIKKN2Q8TEU8 576 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 IGSF8Q969P0 613 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 PGAP3Q96FM1 320 aaPredicted RBP15.58■□□□□ 0.09
UBE3B-212ENST00000540230 ARHGEF38Q9NXL2 777 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 TAS2R14Q9NYV8 317 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 GMEB2Q9UKD1 530 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 STAP1Q9ULZ2 295 aa15.58■□□□□ 0.09
UBE3B-212ENST00000540230 LAMA1P25391 3075 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 THADAQ6YHU6 1953 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 RALGAPA1Q6GYQ0 2036 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 F5H5T6 163 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 LUC7L3O95232 432 aaKnown RBP15.58■□□□□ 0.08
UBE3B-212ENST00000540230 SLC2A3P11169 496 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 P2RY2P41231 377 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 NSFP46459 744 aaKnown RBP15.58■□□□□ 0.08
UBE3B-212ENST00000540230 SPEM2Q0P670 501 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 PTPRNQ16849 979 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms