RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 CALN1Q9BXU9 219 aa19.56■□□□□ 0.72
TNFRSF1A-213ENST00000540022 DCLK3Q9C098 648 aa19.56■□□□□ 0.72
TNFRSF1A-213ENST00000540022 LSM7Q9UK45 103 aaKnown RBP19.56■□□□□ 0.72
TNFRSF1A-213ENST00000540022 ZNF185O15231 689 aa19.56■□□□□ 0.72
TNFRSF1A-213ENST00000540022 CREB3O43889 395 aa19.56■□□□□ 0.72
TNFRSF1A-213ENST00000540022 VIPR2P41587 438 aa19.56■□□□□ 0.72
TNFRSF1A-213ENST00000540022 CDKN2BP42772 138 aa19.56■□□□□ 0.72
TNFRSF1A-213ENST00000540022 FAM133BQ5BKY9 247 aaKnown RBP19.56■□□□□ 0.72
TNFRSF1A-213ENST00000540022 SPOCD1Q6ZMY3 1216 aa19.56■□□□□ 0.72
TNFRSF1A-213ENST00000540022 CCDC50Q8IVM0 306 aa19.56■□□□□ 0.72
TNFRSF1A-213ENST00000540022 MAP7D3Q8IWC1 876 aa19.56■□□□□ 0.72
TNFRSF1A-213ENST00000540022 CELF5Q8N6W0 485 aaKnown RBP19.56■□□□□ 0.72
TNFRSF1A-213ENST00000540022 TSC1Q92574 1164 aa19.56■□□□□ 0.72
TNFRSF1A-213ENST00000540022 LRRC3BQ96PB8 259 aa19.56■□□□□ 0.72
TNFRSF1A-213ENST00000540022 KIF9Q9HAQ2 790 aa19.56■□□□□ 0.72
TNFRSF1A-213ENST00000540022 CWC15Q9P013 229 aaKnown RBP19.56■□□□□ 0.72
TNFRSF1A-213ENST00000540022 DENND4CQ5VZ89 1909 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 E2F8A0AVK6 867 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 LOC730098B7Z3J9 87 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 CEP104O60308 925 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 LRIG2O94898 1065 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 LATS1O95835 1130 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 LAMP2P13473 410 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 GOT1P17174 413 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 FCARP24071 287 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 SLC6A4P31645 630 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 NRG1Q02297 640 aaPredicted RBP19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 AUHQ13825 339 aaKnown RBP19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 TAZQ16635 292 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 MANEALQ5VSG8 457 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 CHSY1Q86X52 802 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 BBS7Q8IWZ6 715 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 MYEOVQ96EZ4 313 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 PBKQ96KB5 322 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 RPGRIP1Q96KN7 1286 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 HERPUD2Q9BSE4 406 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 TRPV4Q9HBA0 871 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 STOML2Q9UJZ1 356 aa19.55■□□□□ 0.72
TNFRSF1A-213ENST00000540022 TECTAO75443 2155 aa19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 C2CD4DB7Z1M9 353 aa19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 EEF2KO00418 725 aaKnown RBP19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 URI1O94763 535 aaPredicted RBP19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 KRT10P13645 584 aa19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 TACR2P21452 398 aa19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 COPS2P61201 443 aa19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 DNTTIP2Q5QJE6 756 aaKnown RBP19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 ADGRF1Q5T601 910 aa19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 SEL1L2Q5TEA6 688 aa19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 FBXL22Q6P050 247 aa19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 RFWD3Q6PCD5 774 aa19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 ZNF683Q8IZ20 524 aa19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 CSPG4P5Q96PW8 444 aa19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 EPAS1Q99814 870 aa19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 ZNF670Q9BS34 389 aa19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 C1QTNF1Q9BXJ1 281 aa19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 C11orf16Q9NQ32 467 aa19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 VANGL2Q9ULK5 521 aa19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 NEU3Q9UQ49 428 aa19.54■□□□□ 0.72
TNFRSF1A-213ENST00000540022 hCG_1818297A0A087WSY0 165 aa19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 E9PAM4 449 aa19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 CES2O00748 559 aa19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 ARL4AP40617 200 aa19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 PPP2R5EQ16537 467 aa19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 TFDP3Q5H9I0 405 aa19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 TANGO2Q6ICL3 276 aa19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 VSIG1Q86XK7 387 aa19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 RNF135Q8IUD6 432 aa19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 RASGEF1CQ8N431 466 aa19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 FAF2Q96CS3 445 aa19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 MS4A14Q96JA4 679 aa19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 RNF157Q96PX1 679 aa19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 HEMGNQ9BXL5 484 aa19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 OSBPL8Q9BZF1 889 aa19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 RCOR3Q9P2K3 495 aaPredicted RBP19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 ZNF510Q9Y2H8 683 aa19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 ZFP37Q9Y6Q3 630 aaPredicted RBP19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 DOCK8Q8NF50 2099 aa19.53■□□□□ 0.72
TNFRSF1A-213ENST00000540022 HEPACAM2A8MVW5 462 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 ZNF487B1APH4 448 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 H3BRJ5 948 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 TRDMT1O14717 391 aaKnown RBP19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 PTPN7P35236 360 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 HCAR3P49019 387 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 TPI1P60174 286 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 ADCY2Q08462 1091 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 ANKRD20A8PQ5CZ79 823 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 ACBD5Q5T8D3 534 aaPredicted RBP19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 KAZNQ674X7 775 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 RFX8Q6ZV50 586 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 OTOP3Q7RTS5 596 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 CREG2Q8IUH2 290 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 FAM217AQ8IXS0 508 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 LGI2Q8N0V4 545 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 PCDH19Q8TAB3 1148 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 IGSF8Q969P0 613 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 ZFP14Q9HCL3 533 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 OBP2AQ9NY56 170 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 SMARCAL1Q9NZC9 954 aa19.52■□□□□ 0.72
TNFRSF1A-213ENST00000540022 IGLV3-10A0A075B6K4 115 aa19.51■□□□□ 0.71
TNFRSF1A-213ENST00000540022 F5H5T6 163 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms