RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 IFNLR1Q8IU57 520 aaPredicted RBP9.94□□□□□ -0.82
CDH13-204ENST00000539548 FBXW8Q8N3Y1 598 aa9.94□□□□□ -0.82
CDH13-204ENST00000539548 PIP4K2CQ8TBX8 421 aa9.94□□□□□ -0.82
CDH13-204ENST00000539548 TFB1MQ8WVM0 346 aaKnown RBP9.94□□□□□ -0.82
CDH13-204ENST00000539548 ARNTL2Q8WYA1 636 aa9.94□□□□□ -0.82
CDH13-204ENST00000539548 KLRG1Q96E93 195 aa9.94□□□□□ -0.82
CDH13-204ENST00000539548 CSPG4P5Q96PW8 444 aa9.94□□□□□ -0.82
CDH13-204ENST00000539548 GORASP1Q9BQQ3 440 aa9.94□□□□□ -0.82
CDH13-204ENST00000539548 SMARCAD1Q9H4L7 1026 aa9.94□□□□□ -0.82
CDH13-204ENST00000539548 PDZD7Q9H5P4 517 aa9.94□□□□□ -0.82
CDH13-204ENST00000539548 PRDM16Q9HAZ2 1276 aa9.94□□□□□ -0.82
CDH13-204ENST00000539548 VCX3AQ9NNX9 186 aa9.94□□□□□ -0.82
CDH13-204ENST00000539548 DTLQ9NZJ0 730 aa9.94□□□□□ -0.82
CDH13-204ENST00000539548 TMEM216Q9P0N5 145 aa9.94□□□□□ -0.82
CDH13-204ENST00000539548 COPG2Q9UBF2 871 aa9.94□□□□□ -0.82
CDH13-204ENST00000539548 WDR90Q96KV7 1748 aa9.94□□□□□ -0.82
CDH13-204ENST00000539548 ZSWIM8A7E2V4 1837 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 COX4I1P13073 169 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 TFE3P19532 575 aaPredicted RBP9.93□□□□□ -0.82
CDH13-204ENST00000539548 MX2P20592 715 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 ACAT1P24752 427 aaKnown RBP9.93□□□□□ -0.82
CDH13-204ENST00000539548 ARRB2P32121 409 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 GMPSP49915 693 aaPredicted RBP9.93□□□□□ -0.82
CDH13-204ENST00000539548 CUL3Q13618 768 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 CCDC153Q494R4 210 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 FSCBQ5H9T9 825 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 CFAP157Q5JU67 520 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 NOL9Q5SY16 702 aaKnown RBP9.93□□□□□ -0.82
CDH13-204ENST00000539548 PRAMEF18Q5VWM3 479 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 METTL21CQ5VZV1 264 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 CASC4Q6P4E1 433 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 EPGNQ6UW88 154 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 EEPD1Q7L9B9 569 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 SDCCAG8Q86SQ7 713 aaPredicted RBP9.93□□□□□ -0.82
CDH13-204ENST00000539548 RSPH3Q86UC2 560 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 KBTBD6Q86V97 674 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 DEFB107AQ8IZN7 70 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 COLGALT1Q8NBJ5 622 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 CLMNQ96JQ2 1002 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 BTBD9Q96Q07 612 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 HAPLN3Q96S86 360 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 KCTD15Q96SI1 283 aaPredicted RBP9.93□□□□□ -0.82
CDH13-204ENST00000539548 MAGEB5Q9BZ81 275 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 PDGFDQ9GZP0 370 aaPredicted RBP9.93□□□□□ -0.82
CDH13-204ENST00000539548 SLC17A6Q9P2U8 582 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 AP4E1Q9UPM8 1137 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 PSAT1Q9Y617 370 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 COMMD3-BMI1R4GMX3 469 aa9.93□□□□□ -0.82
CDH13-204ENST00000539548 SF3B1O75533 1304 aaKnown RBP eCLIP9.93□□□□□ -0.82
CDH13-204ENST00000539548 AP1G1O43747 822 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 PEX10O60683 326 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 PDE5AO76074 875 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 SORBS2O94875 1100 aaKnown RBP9.92□□□□□ -0.82
CDH13-204ENST00000539548 CCDC130P13994 396 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 CPA3P15088 417 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 VAV1P15498 845 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 NCF2P19878 526 aaPredicted RBP9.92□□□□□ -0.82
CDH13-204ENST00000539548 MGAT1P26572 445 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 TYK2P29597 1187 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 SCNN1AP37088 669 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 GARSP41250 739 aaKnown RBP9.92□□□□□ -0.82
CDH13-204ENST00000539548 AQP4P55087 323 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 MTTPP55157 894 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 CRADDP78560 199 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 PPM1JQ5JR12 505 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 GRTP1Q5TC63 336 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 NCBP2-AS2Q69YL0 99 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 FRMD7Q6ZUT3 714 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 ACOT1Q86TX2 421 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 KCNK16Q96T55 309 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 RTKNQ9BST9 563 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 B3GNT5Q9BYG0 378 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 GGA3Q9NZ52 723 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 NDUFA13Q9P0J0 144 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 ADAM28Q9UKQ2 775 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 ARHGAP26Q9UNA1 814 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 PCDHB12Q9Y5F1 795 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 CDY2AQ9Y6F7 541 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 CDY1Q9Y6F8 540 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 USP3Q9Y6I4 520 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 CITO14578 2027 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 MYO18AQ92614 2054 aaKnown RBP9.92□□□□□ -0.82
CDH13-204ENST00000539548 SCN4AP35499 1836 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 H3BNX3 289 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 OPHN1O60890 802 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 C22orf31O95567 290 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 PEX2P28328 305 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 GP5P40197 560 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 MAGEA12P43365 314 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 NUMBP49757 651 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 RPS6KA3P51812 740 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 SESN2P58004 480 aaPredicted RBP9.92□□□□□ -0.82
CDH13-204ENST00000539548 TBL3Q12788 808 aaKnown RBP9.92□□□□□ -0.82
CDH13-204ENST00000539548 KLF10Q13118 480 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 ITGA9Q13797 1035 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 LRRC36Q1X8D7 754 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 VWA5B1Q5TIE3 1220 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 SLC26A9Q7LBE3 791 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 HPS6Q86YV9 775 aa9.92□□□□□ -0.82
CDH13-204ENST00000539548 PHTF2Q8N3S3 785 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms