RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 MFHAS1Q9Y4C4 1052 aa17.63■□□□□ 0.41
PCDHB17P-201ENST00000539533 ZNF487B1APH4 448 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 VNN2O95498 520 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 ANP32DO95626 131 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 BRAFP15056 766 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 ADRA1BP35368 520 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 GPS1Q13098 491 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 GPR17Q13304 367 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 IZUMO3Q5VZ72 239 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 SCD5Q86SK9 330 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 TAC4Q86UU9 113 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 FAM71DQ8N9W8 422 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 RSAD2Q8WXG1 361 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 C8orf48Q96LL4 319 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 TMEM106CQ9BVX2 250 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 NMUR1Q9HB89 426 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 PRKAG3Q9UGI9 489 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 C15orf41Q9Y2V0 281 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 MTMR11A4FU01 709 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 KIAA0355O15063 1070 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 TCEA3O75764 348 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 TGM2P21980 687 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 USP46P62068 366 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 SPOUT1Q5T280 376 aaKnown RBP17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 DARS2Q6PI48 645 aaKnown RBP17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 ANKS3Q6ZW76 656 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 PSTKQ8IV42 348 aaKnown RBP17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 NUP93Q8N1F7 819 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 KIF2BQ8N4N8 673 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 CCDC33Q8N5R6 958 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 FITM2Q8N6M3 262 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 DQX1Q8TE96 717 aaKnown RBP17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 ZNF689Q96CS4 500 aaPredicted RBP17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 IGSF21Q96ID5 467 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 TGS1Q96RS0 853 aaKnown RBP17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 RXFP1Q9HBX9 757 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 RRN3Q9NYV6 651 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 FBXW11Q9UKB1 542 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 NUDT5Q9UKK9 219 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 CDY1Q9Y6F8 540 aa17.62■□□□□ 0.41
PCDHB17P-201ENST00000539533 FAM72CH0Y354 149 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 ADAM12O43184 909 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 CREB3O43889 395 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 EFEMP2O95967 443 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 KRT16P08779 473 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 RPL17P18621 184 aaKnown RBP17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 GCKP35557 465 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 ARL4AP40617 200 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 WDR5P61964 334 aaKnown RBP17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 GBE1Q04446 702 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 SLC10A2Q12908 348 aaPredicted RBP17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 EFHC2Q5JST6 749 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 FAM72AQ5TYM5 149 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 FAM72DQ6L9T8 149 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 FAM72BQ86X60 149 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 SLC9A7Q96T83 725 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 PCDH9Q9HC56 1237 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 BATF3Q9NR55 127 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 ARHGEF3Q9NR81 526 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 NINJ2Q9NZG7 142 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 H7C0C1 242 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 H7C4K7 107 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 HSPA1AP0DMV8 641 aaKnown RBP17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 HSPA1BP0DMV9 641 aaKnown RBP17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 MAGEA11P43364 429 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 ATP5OP48047 213 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 ROR1Q01973 937 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 CAV1Q03135 178 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 BTBD8Q5XKL5 378 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 KCNT2Q6UVM3 1135 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 CYP4X1Q8N118 509 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 RNF139Q8WU17 664 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 WDCPQ9H6R7 721 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 ABCC13Q9NSE7 274 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 OSER1Q9NX31 292 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 NOP53Q9NZM5 478 aaKnown RBP17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 ZNF638Q14966 1978 aaKnown RBP17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 LTBP2Q14767 1821 aa17.61■□□□□ 0.41
PCDHB17P-201ENST00000539533 A0A1W2PQH9 124 aa17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 C2CD2LO14523 706 aa17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 F9P00740 461 aa17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 STX2P32856 288 aa17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 CXCR3P49682 368 aa17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 CTCFP49711 727 aaPredicted RBP17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 DUSP4Q13115 394 aa17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 USP41Q3LFD5 358 aa17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 MGAT5BQ3V5L5 792 aa17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 NCBP2-AS2Q69YL0 99 aa17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 ASRGL1Q7L266 308 aa17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 TAB3Q8N5C8 712 aaPredicted RBP17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 FBXO22Q8NEZ5 403 aa17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 PRCCQ92733 491 aaPredicted RBP17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 NTAN1Q96AB6 310 aa17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 SPDL1Q96EA4 605 aa17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 RMDN2Q96LZ7 410 aa17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 SEPT5Q99719 369 aaPredicted RBP17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 ARHGEF4Q9NR80 690 aa17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 SFMBT1Q9UHJ3 866 aa17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 LGALS13Q9UHV8 139 aa17.6■□□□□ 0.41
PCDHB17P-201ENST00000539533 COL4A4P53420 1690 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms