RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 CXCL17Q6UXB2 119 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 GPRIN1Q7Z2K8 1008 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 KIF2BQ8N4N8 673 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 RFWD2Q8NHY2 731 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 RAB3IL1Q8TBN0 382 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 ARNTL2Q8WYA1 636 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 IRGQQ8WZA9 623 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 LPPQ93052 612 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 TMEM30AQ9NV96 361 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 TRIM33Q9UPN9 1127 aa18.44■□□□□ 0.54
GNE-204ENST00000539208 FAM72CH0Y354 149 aa18.43■□□□□ 0.54
GNE-204ENST00000539208 TRAFD1O14545 582 aaPredicted RBP18.43■□□□□ 0.54
GNE-204ENST00000539208 T-ENOLP0DO92 83 aa18.43■□□□□ 0.54
GNE-204ENST00000539208 ERCC2P18074 760 aa18.43■□□□□ 0.54
GNE-204ENST00000539208 RASSF2P50749 326 aa18.43■□□□□ 0.54
GNE-204ENST00000539208 NIPAL4Q0D2K0 466 aa18.43■□□□□ 0.54
GNE-204ENST00000539208 STXBP5Q5T5C0 1151 aa18.43■□□□□ 0.54
GNE-204ENST00000539208 FAM72AQ5TYM5 149 aa18.43■□□□□ 0.54
GNE-204ENST00000539208 FAM72DQ6L9T8 149 aa18.43■□□□□ 0.54
GNE-204ENST00000539208 ZNF449Q6P9G9 518 aa18.43■□□□□ 0.54
GNE-204ENST00000539208 BHLHA9Q7RTU4 235 aa18.43■□□□□ 0.54
GNE-204ENST00000539208 FAM72BQ86X60 149 aa18.43■□□□□ 0.54
GNE-204ENST00000539208 SCML4Q8N228 414 aa18.43■□□□□ 0.54
GNE-204ENST00000539208 BAIAP2L1Q9UHR4 511 aa18.43■□□□□ 0.54
GNE-204ENST00000539208 MTO1Q9Y2Z2 717 aaKnown RBP18.43■□□□□ 0.54
GNE-204ENST00000539208 TIMM13Q9Y5L4 95 aaPredicted RBP18.43■□□□□ 0.54
GNE-204ENST00000539208 HNRNPCL1O60812 293 aaKnown RBP18.42■□□□□ 0.54
GNE-204ENST00000539208 USP17L7P0C7H9 530 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 NEFHP12036 1026 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 NCAM1P13591 858 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 PAX3P23760 479 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 PSMB4P28070 264 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 SCNN1GP51170 649 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 CACNA2D1P54289 1103 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 OVGP1Q12889 678 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 IFRD2Q12894 506 aaPredicted RBP18.42■□□□□ 0.54
GNE-204ENST00000539208 BMPR2Q13873 1038 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 PM20D1Q6GTS8 502 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 ACMSDQ8TDX5 336 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 CDKL2Q92772 493 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 ANLNQ9NQW6 1124 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 SIRPGQ9P1W8 387 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 ZFP69BQ9UJL9 534 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 COL4A4P53420 1690 aaPredicted RBP18.42■□□□□ 0.54
GNE-204ENST00000539208 I6L893 689 aaPredicted RBP18.42■□□□□ 0.54
GNE-204ENST00000539208 BIRC5O15392 142 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 DNAJC6O75061 913 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 DLDP09622 509 aaKnown RBP18.42■□□□□ 0.54
GNE-204ENST00000539208 ODC1P11926 461 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 CXCR3P49682 368 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 RAB27AP51159 221 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 TPI1P60174 286 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 TIGD5Q53EQ6 642 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 FAM171BQ6P995 826 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 CLNKQ7Z7G1 428 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 C7orf26Q96N11 449 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 ACBD6Q9BR61 282 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 COLEC11Q9BWP8 271 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 KCNK13Q9HB14 408 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 SPC25Q9HBM1 224 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 SEPT10Q9P0V9 454 aa18.42■□□□□ 0.54
GNE-204ENST00000539208 MTSS1O43312 755 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 CYP11A1P05108 521 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 CTSHP09668 335 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 MGAT1P26572 445 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 CTGFP29279 349 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 ARFIP2P53365 341 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 PPIDQ08752 370 aaKnown RBP18.41■□□□□ 0.54
GNE-204ENST00000539208 DBN1Q16643 649 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 TAF1BQ53T94 588 aaPredicted RBP18.41■□□□□ 0.54
GNE-204ENST00000539208 MROH9Q5TGP6 573 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 ATG16L1Q676U5 607 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 RGMBQ6NW40 437 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 CASC4Q6P4E1 433 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 MTDHQ86UE4 582 aaKnown RBP18.41■□□□□ 0.54
GNE-204ENST00000539208 NDUFAF2Q8N183 169 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 ADAM32Q8TC27 787 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 RTP3Q9BQQ7 232 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 TUBB6Q9BUF5 446 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 SLC13A1Q9BZW2 595 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 AGO3Q9H9G7 860 aaKnown RBP18.41■□□□□ 0.54
GNE-204ENST00000539208 DDIT4Q9NX09 232 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 DCTN4Q9UJW0 460 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 ZNF638Q14966 1978 aaKnown RBP18.41■□□□□ 0.54
GNE-204ENST00000539208 PTPN3P26045 913 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 TARSP26639 723 aaKnown RBP18.41■□□□□ 0.54
GNE-204ENST00000539208 RABGGTBP53611 331 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 SESN2P58004 480 aaPredicted RBP18.41■□□□□ 0.54
GNE-204ENST00000539208 CRYMQ14894 314 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 CTC1Q2NKJ3 1217 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 WLSQ5T9L3 541 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 MFSD14CQ5VZR4 134 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 PID1Q7Z2X4 250 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 SLC7A6OSQ96CW6 309 aaPredicted RBP18.41■□□□□ 0.54
GNE-204ENST00000539208 LNPEPQ9UIQ6 1025 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 HAO1Q9UJM8 370 aa18.41■□□□□ 0.54
GNE-204ENST00000539208 CASTOR2A6NHX0 329 aa18.4■□□□□ 0.54
GNE-204ENST00000539208 MX2P20592 715 aa18.4■□□□□ 0.54
GNE-204ENST00000539208 CDK18Q07002 472 aa18.4■□□□□ 0.54
GNE-204ENST00000539208 KYAT3Q6YP21 454 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms