RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 FCHO2Q0JRZ9 810 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 ARTNQ5T4W7 220 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 TRIM68Q6AZZ1 485 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 FBXL22Q6P050 247 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 SYT10Q6XYQ8 523 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 MFSD6LQ8IWD5 586 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 ZNF683Q8IZ20 524 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 ZDHHC14Q8IZN3 488 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 PLCD3Q8N3E9 789 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 RNF25Q96BH1 459 aaPredicted RBP24.28■■□□□ 1.48
TMEM260-202ENST00000538838 DUS2Q9NX74 493 aaKnown RBP24.28■■□□□ 1.48
TMEM260-202ENST00000538838 TBC1D14Q9P2M4 693 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 NEU3Q9UQ49 428 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 ESPNB1AK53 854 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 TSPAN3O60637 253 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 LRIG2O94898 1065 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 GOT1P17174 413 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 KDELR1P24390 212 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 IFNAR2P48551 515 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 IRAK1P51617 712 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 NRG1Q02297 640 aaPredicted RBP24.28■■□□□ 1.48
TMEM260-202ENST00000538838 DPYSL3Q14195 570 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 AAK1Q2M2I8 961 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 ODF2Q5BJF6 829 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 MANEALQ5VSG8 457 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 DEPDC1BQ8WUY9 529 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 OSCP1Q8WVF1 389 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 DDX50Q9BQ39 737 aaKnown RBP24.28■■□□□ 1.48
TMEM260-202ENST00000538838 CALN1Q9BXU9 219 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 LIMD1Q9UGP4 676 aa24.28■■□□□ 1.48
TMEM260-202ENST00000538838 TICRRQ7Z2Z1 1910 aa24.27■■□□□ 1.48
TMEM260-202ENST00000538838 C3orf70A6NLC5 250 aaPredicted RBP24.27■■□□□ 1.48
TMEM260-202ENST00000538838 EEF2KO00418 725 aaKnown RBP24.27■■□□□ 1.48
TMEM260-202ENST00000538838 SLC9A3R1O14745 358 aaPredicted RBP24.27■■□□□ 1.48
TMEM260-202ENST00000538838 PSMC3P17980 439 aa24.27■■□□□ 1.48
TMEM260-202ENST00000538838 MMRN1Q13201 1228 aa24.27■■□□□ 1.48
TMEM260-202ENST00000538838 ZNF211Q13398 564 aaPredicted RBP24.27■■□□□ 1.48
TMEM260-202ENST00000538838 ANKS1BQ7Z6G8 1248 aa24.27■■□□□ 1.48
TMEM260-202ENST00000538838 YAF2Q8IY57 180 aa24.27■■□□□ 1.48
TMEM260-202ENST00000538838 CPXM2Q8N436 756 aa24.27■■□□□ 1.48
TMEM260-202ENST00000538838 KIAA1958Q8N8K9 716 aa24.27■■□□□ 1.48
TMEM260-202ENST00000538838 EXD1Q8NHP7 514 aa24.27■■□□□ 1.48
TMEM260-202ENST00000538838 FAM71BQ8TC56 605 aa24.27■■□□□ 1.48
TMEM260-202ENST00000538838 IGSF8Q969P0 613 aa24.27■■□□□ 1.48
TMEM260-202ENST00000538838 NAPGQ99747 312 aaPredicted RBP24.27■■□□□ 1.48
TMEM260-202ENST00000538838 EPAS1Q99814 870 aa24.27■■□□□ 1.48
TMEM260-202ENST00000538838 THG1LQ9NWX6 298 aaKnown RBP24.27■■□□□ 1.48
TMEM260-202ENST00000538838 CWC15Q9P013 229 aaKnown RBP24.27■■□□□ 1.48
TMEM260-202ENST00000538838 GFRA2O00451 464 aa24.26■■□□□ 1.47
TMEM260-202ENST00000538838 KCNK3O14649 394 aa24.26■■□□□ 1.47
TMEM260-202ENST00000538838 TPI1P60174 286 aa24.26■■□□□ 1.47
TMEM260-202ENST00000538838 PDK2Q15119 407 aa24.26■■□□□ 1.47
TMEM260-202ENST00000538838 EML3Q32P44 896 aa24.26■■□□□ 1.47
TMEM260-202ENST00000538838 ACBD5Q5T8D3 534 aaPredicted RBP24.26■■□□□ 1.47
TMEM260-202ENST00000538838 AADACL2Q6P093 401 aa24.26■■□□□ 1.47
TMEM260-202ENST00000538838 MFSD7Q6UXD7 560 aa24.26■■□□□ 1.47
TMEM260-202ENST00000538838 CIR1Q86X95 450 aaPredicted RBP24.26■■□□□ 1.47
TMEM260-202ENST00000538838 CCDC50Q8IVM0 306 aa24.26■■□□□ 1.47
TMEM260-202ENST00000538838 UBE2Q2Q8WVN8 375 aa24.26■■□□□ 1.47
TMEM260-202ENST00000538838 TSC1Q92574 1164 aa24.26■■□□□ 1.47
TMEM260-202ENST00000538838 OTUB2Q96DC9 234 aa24.26■■□□□ 1.47
TMEM260-202ENST00000538838 P2RY11Q96G91 374 aa24.26■■□□□ 1.47
TMEM260-202ENST00000538838 RPRD1AQ96P16 312 aaPredicted RBP24.26■■□□□ 1.47
TMEM260-202ENST00000538838 CTAGE9A4FU28 777 aa24.25■■□□□ 1.47
TMEM260-202ENST00000538838 ZRANB2O95218 330 aaKnown RBP eCLIP24.25■■□□□ 1.47
TMEM260-202ENST00000538838 PYGMP11217 842 aa24.25■■□□□ 1.47
TMEM260-202ENST00000538838 ARSAP15289 507 aa24.25■■□□□ 1.47
TMEM260-202ENST00000538838 CXCR5P32302 372 aa24.25■■□□□ 1.47
TMEM260-202ENST00000538838 CHKAP35790 457 aa24.25■■□□□ 1.47
TMEM260-202ENST00000538838 ARL4AP40617 200 aa24.25■■□□□ 1.47
TMEM260-202ENST00000538838 LLGL1Q15334 1064 aa24.25■■□□□ 1.47
TMEM260-202ENST00000538838 RWDD4Q6NW29 188 aaKnown RBP24.25■■□□□ 1.47
TMEM260-202ENST00000538838 LRRC31Q6UY01 552 aa24.25■■□□□ 1.47
TMEM260-202ENST00000538838 TPGS1Q6ZTW0 290 aa24.25■■□□□ 1.47
TMEM260-202ENST00000538838 MAP7D3Q8IWC1 876 aa24.25■■□□□ 1.47
TMEM260-202ENST00000538838 CFAP52Q8N1V2 620 aa24.25■■□□□ 1.47
TMEM260-202ENST00000538838 BHMTQ93088 406 aa24.25■■□□□ 1.47
TMEM260-202ENST00000538838 TBC1D31Q96DN5 1066 aa24.25■■□□□ 1.47
TMEM260-202ENST00000538838 RBM41Q96IZ5 413 aaKnown RBP24.25■■□□□ 1.47
TMEM260-202ENST00000538838 CSPG4P5Q96PW8 444 aa24.25■■□□□ 1.47
TMEM260-202ENST00000538838 KCNK12Q9HB15 430 aa24.25■■□□□ 1.47
TMEM260-202ENST00000538838 TCF20Q9UGU0 1960 aaKnown RBP24.25■■□□□ 1.47
TMEM260-202ENST00000538838 COL4A2P08572 1712 aa24.25■■□□□ 1.47
TMEM260-202ENST00000538838 LOC730098B7Z3J9 87 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 H3BRJ5 948 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 IL4RP24394 825 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 GDI1P31150 447 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 RPS24P62847 133 aaKnown RBP24.24■■□□□ 1.47
TMEM260-202ENST00000538838 SPOCD1Q6ZMY3 1216 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 RFX8Q6ZV50 586 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 RCOR2Q8IZ40 523 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 FAM83CQ9BQN1 747 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 ZNF670Q9BS34 389 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 EBF3Q9H4W6 596 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 MPP6Q9NZW5 540 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 IGLV3-10A0A075B6K4 115 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 ASGR2P07307 311 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 EPHB2P29323 1055 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 HOXC13P31276 330 aa24.24■■□□□ 1.47
TMEM260-202ENST00000538838 CASQ1P31415 396 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms