RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 CLCN6P51797 869 aa20.12■□□□□ 0.81
EFCAB11-202ENST00000538485 BRD3Q15059 726 aa20.12■□□□□ 0.81
EFCAB11-202ENST00000538485 TRIP13Q15645 432 aaPredicted RBP20.12■□□□□ 0.81
EFCAB11-202ENST00000538485 NUGGCQ68CJ6 796 aa20.12■□□□□ 0.81
EFCAB11-202ENST00000538485 C14orf80Q86SX3 495 aa20.12■□□□□ 0.81
EFCAB11-202ENST00000538485 CCDC33Q8N5R6 958 aa20.12■□□□□ 0.81
EFCAB11-202ENST00000538485 ATP6V0D2Q8N8Y2 350 aa20.12■□□□□ 0.81
EFCAB11-202ENST00000538485 NETO2Q8NC67 525 aa20.12■□□□□ 0.81
EFCAB11-202ENST00000538485 TRPC7Q9HCX4 862 aa20.12■□□□□ 0.81
EFCAB11-202ENST00000538485 SLC12A6Q9UHW9 1150 aa20.12■□□□□ 0.81
EFCAB11-202ENST00000538485 EYSQ5T1H1 3165 aa20.12■□□□□ 0.81
EFCAB11-202ENST00000538485 A0A1W2PRU2 124 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 TNFRSF8P28908 595 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 GDF10P55107 478 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 COG7P83436 770 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 RBM10P98175 930 aaKnown RBP20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 CYP4F8P98187 520 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 NRG1Q02297 640 aaPredicted RBP20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 PAFAH1B3Q15102 231 aaKnown RBP20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 RWDD4Q6NW29 188 aaKnown RBP20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 TMCO3Q6UWJ1 677 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 LRRN4Q8WUT4 740 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 ASAH2Q9NR71 780 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 E9PAM4 449 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 SGK1O00141 431 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 OLFM2O95897 454 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 ETS1P14921 441 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 GJA1P17302 382 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 HOXA9P31269 272 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 HOXC13P31276 330 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 CCR2P41597 374 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 RPL21P46778 160 aaKnown RBP20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 AUHQ13825 339 aaKnown RBP20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 PTK6Q13882 451 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 SYDE1Q6ZW31 735 aaPredicted RBP20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 UNC45BQ8IWX7 931 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 TP53INP2Q8IXH6 220 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 ZNF683Q8IZ20 524 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 ARL14EPQ8N8R7 260 aaPredicted RBP20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 ZFRQ96KR1 1074 aaKnown RBP20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 OLFM3Q96PB7 478 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 KLF16Q9BXK1 252 aaPredicted RBP20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 ATXN3LQ9H3M9 355 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 TLE6Q9H808 572 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 ARGLU1Q9NWB6 273 aaPredicted RBP20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 VANGL2Q9ULK5 521 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 NFU1Q9UMS0 254 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 SNX24Q9Y343 169 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 NUP205Q92621 2012 aa20.11■□□□□ 0.81
EFCAB11-202ENST00000538485 H7C0C1 242 aa20.1■□□□□ 0.81
EFCAB11-202ENST00000538485 RFXAPO00287 272 aa20.1■□□□□ 0.81
EFCAB11-202ENST00000538485 STC2O76061 302 aa20.1■□□□□ 0.81
EFCAB11-202ENST00000538485 ZSCAN5DPP0CG00 497 aa20.1■□□□□ 0.81
EFCAB11-202ENST00000538485 MYL4P12829 197 aa20.1■□□□□ 0.81
EFCAB11-202ENST00000538485 HDCP19113 662 aa20.1■□□□□ 0.81
EFCAB11-202ENST00000538485 ECHS1P30084 290 aa20.1■□□□□ 0.81
EFCAB11-202ENST00000538485 ATP5OP48047 213 aa20.1■□□□□ 0.81
EFCAB11-202ENST00000538485 DRG2P55039 364 aaKnown RBP20.1■□□□□ 0.81
EFCAB11-202ENST00000538485 ZNF697Q5TEC3 545 aa20.1■□□□□ 0.81
EFCAB11-202ENST00000538485 DARS2Q6PI48 645 aaKnown RBP20.1■□□□□ 0.81
EFCAB11-202ENST00000538485 NPWQ8N729 165 aa20.1■□□□□ 0.81
EFCAB11-202ENST00000538485 MRPS31Q92665 395 aaKnown RBP20.1■□□□□ 0.81
EFCAB11-202ENST00000538485 LMAN2LQ9H0V9 348 aa20.1■□□□□ 0.81
EFCAB11-202ENST00000538485 SMPD4Q9NXE4 827 aa20.1■□□□□ 0.81
EFCAB11-202ENST00000538485 DNMT3BQ9UBC3 853 aaKnown RBP20.1■□□□□ 0.81
EFCAB11-202ENST00000538485 KRT14P02533 472 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 KLKB1P03952 638 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 MBL2P11226 248 aaPredicted RBP20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 IVDP26440 423 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 HTR7P34969 479 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 HARS2P49590 506 aaKnown RBP20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 VPS41P49754 854 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 NRLP54845 237 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 ZXDBP98169 803 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 STXBP5Q5T5C0 1151 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 RAP1GAP2Q684P5 730 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 NADSYN1Q6IA69 706 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 MAB21L3Q8N8X9 362 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 FAM71DQ8N9W8 422 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 TBC1D31Q96DN5 1066 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 PRMT1Q99873 361 aaKnown RBP20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 USP29Q9HBJ7 922 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 MPP6Q9NZW5 540 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 ASIC3Q9UHC3 531 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 IFNB1P01574 187 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 HNRNPA1P09651 372 aaKnown RBP eCLIP20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 PTPN2P17706 415 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 CDC25CP30307 473 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 NRIP1P48552 1158 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 EPHA5P54756 1037 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 XRCC4Q13426 336 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 CUL1Q13616 776 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 FAM182AQ5T1J6 154 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 CCDC89Q8N998 374 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 HNRNPLLQ8WVV9 542 aaKnown RBP20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 RSAD2Q8WXG1 361 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 WBP2Q969T9 261 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 PLD4Q96BZ4 506 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 TIFAQ96CG3 184 aa20.09■□□□□ 0.81
EFCAB11-202ENST00000538485 FAM114A2Q9NRY5 505 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms