RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 OVGP1Q12889 678 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 RFTN1Q14699 578 aaPredicted RBP6.9□□□□□ -1.3
USP28-207ENST00000538475 TGFBIQ15582 683 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 ARHGAP44Q17R89 818 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 GRAMD1BQ3KR37 738 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 RABGAP1LQ5R372 815 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 OLFML1Q6UWY5 402 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 TPTE2Q6XPS3 522 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 TIFABQ6ZNK6 161 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 PRR23CQ6ZRP0 262 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 DCDC5Q6ZRR9 648 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 CYS1Q717R9 158 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 LPCAT2Q7L5N7 544 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 ZNF720Q7Z2F6 126 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 VN1R5Q7Z5H4 357 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 NLRX1Q86UT6 975 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 SLC26A11Q86WA9 606 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 CATSPER3Q86XQ3 398 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 PALB2Q86YC2 1186 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 MCF2L2Q86YR7 1114 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 PALM2Q8IXS6 379 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 MCOLN2Q8IZK6 566 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 LZTR1Q8N653 840 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 METTL25Q8N6Q8 603 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 PACRGLQ8N7B6 248 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 TRIML2Q8N7C3 387 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 TNIP2Q8NFZ5 429 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 TSPAN14Q8NG11 270 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 PNPT1Q8TCS8 783 aaKnown RBP6.9□□□□□ -1.3
USP28-207ENST00000538475 UBASH3BQ8TF42 649 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 ZNF384Q8TF68 577 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 SLC20A1Q8WUM9 679 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 CRYGNQ8WXF5 182 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 SLC5A5Q92911 643 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 LRRC39Q96DD0 335 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 DUS3LQ96G46 650 aaKnown RBP6.9□□□□□ -1.3
USP28-207ENST00000538475 FAM84BQ96KN1 310 aaPredicted RBP6.9□□□□□ -1.3
USP28-207ENST00000538475 PCDHB18PQ96TA0 734 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 EYA3Q99504 573 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 PSD2Q9BQI7 771 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 IMPG2Q9BZV3 1241 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 DRC3Q9H069 523 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 ST6GALNAC4Q9H4F1 302 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 ZHX3Q9H4I2 956 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 PDZD7Q9H5P4 517 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 LIN7BQ9HAP6 207 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 AGPAT3Q9NRZ7 376 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 DDX18Q9NVP1 670 aaKnown RBP6.9□□□□□ -1.3
USP28-207ENST00000538475 GID8Q9NWU2 228 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 TMEM260Q9NX78 707 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 ARHGEF38Q9NXL2 777 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 IP6K2Q9UHH9 426 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 ANAPC7Q9UJX3 599 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 GNEQ9Y223 722 aaKnown RBP6.9□□□□□ -1.3
USP28-207ENST00000538475 MYRFQ9Y2G1 1151 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 INPP5FQ9Y2H2 1132 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 GIT1Q9Y2X7 761 aa6.9□□□□□ -1.3
USP28-207ENST00000538475 SNED1Q8TER0 1413 aa6.9□□□□□ -1.31
USP28-207ENST00000538475 A0A1W2PP55 124 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 TRIM64A6NGJ6 449 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 METTL12A8MUP2 240 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 H3BNH8 94 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 SOX1O00570 391 aaPredicted RBP6.89□□□□□ -1.31
USP28-207ENST00000538475 ADCY6O43306 1168 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 ADAM11O75078 769 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 KRT38O76015 456 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 CYP3A4P08684 503 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 PDGFRBP09619 1106 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 OCM2P0CE71 109 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 OCMP0CE72 109 aaPredicted RBP6.89□□□□□ -1.31
USP28-207ENST00000538475 THRAP10827 490 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 CYP2C9P11712 490 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 UNGP13051 313 aaPredicted RBP6.89□□□□□ -1.31
USP28-207ENST00000538475 KRT5P13647 590 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 IL2RBP14784 551 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 CYP11B1P15538 503 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 BGNP21810 368 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 SERPINB6P35237 376 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 ARSEP51690 589 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 STAT2P52630 851 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 C21orf59P57076 290 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 GPX6P59796 221 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 ARPC4P59998 168 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 TMPRSS15P98073 1019 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 GCNT1Q02742 428 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 KDSRQ06136 332 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 TMEM62Q0P6H9 643 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 GRSF1Q12849 480 aaKnown RBP eCLIP6.89□□□□□ -1.31
USP28-207ENST00000538475 GPS1Q13098 491 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 PPIL2Q13356 520 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 HERC3Q15034 1050 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 TRIP13Q15645 432 aaPredicted RBP6.89□□□□□ -1.31
USP28-207ENST00000538475 OASLQ15646 514 aaKnown RBP6.89□□□□□ -1.31
USP28-207ENST00000538475 CBWD6Q4V339 395 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 TEX44Q53QW1 395 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 CBWD3Q5JTY5 395 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 CBWD5Q5RIA9 395 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 FAXCQ5TGI0 409 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 LPCAT4Q643R3 524 aa6.89□□□□□ -1.31
USP28-207ENST00000538475 PLA2G4FQ68DD2 849 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms