RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 TXNL4AP83876 142 aaKnown RBP10.97□□□□□ -0.65
RTN3-208ENST00000537981 CENPCQ03188 943 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 CEACAM7Q14002 265 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 TOMM20Q15388 145 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 MOGQ16653 247 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 TMTC4Q5T4D3 741 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 CYP4A22Q5TCH4 519 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 TXNRD3NBQ6F5E7 133 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 RINT1Q6NUQ1 792 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 ZNF786Q8N393 782 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 NAT16Q8N8M0 369 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 HCAR2Q8TDS4 363 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 MARK4Q96L34 752 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 CDRT15Q96T59 188 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 CCDC68Q9H2F9 335 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 TRIT1Q9H3H1 467 aaKnown RBP10.97□□□□□ -0.65
RTN3-208ENST00000537981 STN1Q9H668 368 aaKnown RBP10.97□□□□□ -0.65
RTN3-208ENST00000537981 PTPRHQ9HD43 1115 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 GTF3C4Q9UKN8 822 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 KIAA1257Q9ULG3 409 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 KCPQ6ZWJ8 1503 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 ROBO3Q96MS0 1386 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 ZSCAN5BA6NJL1 495 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 USP17L5A8MUK1 530 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 CDK2AP1O14519 115 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 ESRRBO95718 433 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 IL1BP01584 269 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 MATN1P21941 496 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 POLR2BP30876 1174 aaKnown RBP10.97□□□□□ -0.65
RTN3-208ENST00000537981 PTPN9P43378 593 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 NUDT2P50583 147 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 CACNB3P54284 484 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 IKBKEQ14164 716 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 SMAD1Q15797 465 aaKnown RBP10.97□□□□□ -0.65
RTN3-208ENST00000537981 NEDD8Q15843 81 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 MTX3Q5HYI7 312 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 PDPK2PQ6A1A2 396 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 FAM117BQ6P1L5 589 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 BBOF1Q8ND07 529 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 ADCY4Q8NFM4 1077 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 AGR3Q8TD06 166 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 CPT1BQ92523 772 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 VCPIP1Q96JH7 1222 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 SIRPGQ9P1W8 387 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 ITGA11Q9UKX5 1188 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 ZBTB1Q9Y2K1 713 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 PLLPQ9Y342 182 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 IFT52Q9Y366 437 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 MROH5Q6ZUA9 1318 aa10.97□□□□□ -0.65
RTN3-208ENST00000537981 ENPP3O14638 875 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 TOR1BO14657 336 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 MSI1O43347 362 aaKnown RBP10.96□□□□□ -0.65
RTN3-208ENST00000537981 TMCC2O75069 709 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 GMNNO75496 209 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 BMP10O95393 424 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 ABCB1P08183 1280 aaPredicted RBP10.96□□□□□ -0.65
RTN3-208ENST00000537981 CFHP08603 1231 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 COX4I1P13073 169 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 SERPINB5P36952 375 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 POLR2IP36954 125 aaKnown RBP10.96□□□□□ -0.65
RTN3-208ENST00000537981 IDH3AP50213 366 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 RPL10AP62906 217 aaKnown RBP10.96□□□□□ -0.65
RTN3-208ENST00000537981 RACK1P63244 317 aaKnown RBP10.96□□□□□ -0.65
RTN3-208ENST00000537981 RALGDSQ12967 914 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 NFATC3Q12968 1075 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 FXNQ16595 210 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 CLEC16AQ2KHT3 1053 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 HYIQ5T013 277 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 ZNF618Q5T7W0 954 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 CCDC81Q6ZN84 652 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 PRR23CQ6ZRP0 262 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 CLEC10AQ8IUN9 316 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 EFHD2Q96C19 240 aaPredicted RBP10.96□□□□□ -0.65
RTN3-208ENST00000537981 CCDC138Q96M89 665 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 FRMD8Q9BZ67 464 aaPredicted RBP10.96□□□□□ -0.65
RTN3-208ENST00000537981 NANOGQ9H9S0 305 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 VPS45Q9NRW7 570 aa10.96□□□□□ -0.65
RTN3-208ENST00000537981 LRP5O75197 1615 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 THSD7AQ9UPZ6 1657 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 SGK1O00141 431 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 NRP1O14786 923 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 GRIN3BO60391 1043 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 PPP1R11O60927 126 aaPredicted RBP10.96□□□□□ -0.66
RTN3-208ENST00000537981 GSRP00390 522 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 SPATA31C1P0DKV0 1188 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 PRKCAP17252 672 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 PRDX5P30044 214 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 RAB15P59190 212 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 ZBTB17Q13105 803 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 MAPK11Q15759 364 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 SLC15A2Q16348 729 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 CEP78Q5JTW2 689 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 MFSD7Q6UXD7 560 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 C4orf22Q6V702 233 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 FAM196AQ6ZSG2 479 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 GALNT13Q8IUC8 556 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 GRAMD2AQ8IUY3 354 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 PALM2Q8IXS6 379 aa10.96□□□□□ -0.66
RTN3-208ENST00000537981 LENG8Q96PV6 779 aaPredicted RBP10.96□□□□□ -0.66
RTN3-208ENST00000537981 CSF3RQ99062 836 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms