RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 SERAC1Q96JX3 654 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 ZNF560Q96MR9 790 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 CLSTN3Q9BQT9 956 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 MTG1Q9BT17 334 aaPredicted RBP8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 BRIP1Q9BX63 1249 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 SLC4A5Q9BY07 1137 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 NAA50Q9GZZ1 169 aaKnown RBP8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 SLA2Q9H6Q3 261 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 PKD2L2Q9NZM6 624 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 IPO11Q9UI26 975 aaKnown RBP8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 ENPP5Q9UJA9 477 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 NIP7Q9Y221 180 aaKnown RBP eCLIP8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 PLLPQ9Y342 182 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 RWDD3Q9Y3V2 267 aa8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 BAZ2BQ9UIF8 2168 aaKnown RBP8.74□□□□□ -1.01
SRGAP1-202ENST00000537556 ROBO3Q96MS0 1386 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 ISPDA4D126 451 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 SGTAO43765 313 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 DAB1O75553 588 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 RNASEH2AO75792 299 aaKnown RBP8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 CCNKO75909 580 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 BCAS2O75934 225 aaPredicted RBP8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 TOMM70O94826 608 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 MFN2O95140 757 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 MYCP01106 439 aaPredicted RBP8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 PRLP01236 227 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 KRT18P05783 430 aaKnown RBP8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 UGT2B4P06133 528 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 GSTM1P09488 218 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 NCF2P19878 526 aaPredicted RBP8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 MX2P20592 715 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 ME2P23368 584 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 SLC9A3P48764 834 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 ARSEP51690 589 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 GPS1Q13098 491 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 BBS9Q3SYG4 887 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 LGSNQ5TDP6 509 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 TRIM72Q6ZMU5 477 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 GADL1Q6ZQY3 521 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 NPLOC4Q8TAT6 608 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 CHAC2Q8WUX2 184 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 IP6K1Q92551 441 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 FIG4Q92562 907 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 TFAP2CQ92754 450 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 APBB2Q92870 758 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 DCPSQ96C86 337 aaKnown RBP8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 SLC10A4Q96EP9 437 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 VMP1Q96GC9 406 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 METTL2AQ96IZ6 378 aaKnown RBP8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 FGFBP2Q9BYJ0 223 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 YTHDF1Q9BYJ9 559 aaKnown RBP8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 EHMT1Q9H9B1 1298 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 ZNF221Q9UK13 617 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 MAU2Q9Y6X3 613 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 RREB1Q92766 1687 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 GAKO14976 1311 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 CLUHO75153 1309 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 KDM3AQ9Y4C1 1321 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 FAM170AA1A519 330 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 SHOXO15266 292 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 AKAP10O43572 662 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 PTPN1P18031 435 aaKnown RBP8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 GARTP22102 1010 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 MYF6P23409 242 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 MLLT6P55198 1093 aaPredicted RBP8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 GALK2Q01415 458 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 PRKCEQ02156 737 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 RAD51Q06609 339 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 TRIM32Q13049 653 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 KLF1Q13351 362 aaPredicted RBP8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 POU6F1Q14863 301 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 NHSL2Q5HYW2 709 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 UNC5AQ6ZN44 842 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 ZBTB49Q6ZSB9 765 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 KCNK18Q7Z418 384 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 BTLAQ7Z6A9 289 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 CATSPER3Q86XQ3 398 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 LACC1Q8IV20 430 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 FAM109AQ8N4B1 249 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 MARCH10Q8NA82 808 aaPredicted RBP8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 KYQ8NBH2 561 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 OR13F1Q8NGS4 319 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 CDKL2Q92772 493 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 BTBD6Q96KE9 485 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 MTMR9Q96QG7 549 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 CDRT15Q96T59 188 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 BEGAINQ9BUH8 593 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 MECRQ9BV79 373 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 GPR88Q9GZN0 384 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 TRPV6Q9H1D0 765 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 C6orf50Q9HD87 102 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 AKIP1Q9NQ31 210 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 PCSK1NQ9UHG2 260 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 POLHQ9Y253 713 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 SLC27A5Q9Y2P5 690 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 ARFGEF2Q9Y6D5 1785 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 NR3C1P04150 777 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 XRCC1P18887 633 aaPredicted RBP8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 GLRA2P23416 452 aa8.73□□□□□ -1.01
SRGAP1-202ENST00000537556 AP2S1P53680 142 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms