RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 JOSD2Q8TAC2 188 aa11.66□□□□□ -0.54
TNC-211ENST00000537320 LENG9Q96B70 501 aa11.66□□□□□ -0.54
TNC-211ENST00000537320 PGM2Q96G03 612 aa11.66□□□□□ -0.54
TNC-211ENST00000537320 SF3B1O75533 1304 aaKnown RBP eCLIP11.66□□□□□ -0.54
TNC-211ENST00000537320 hCG_1818297A0A087WSY0 165 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 SMIM28A0A1B0GU29 152 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 RPL22P35268 128 aaKnown RBP11.65□□□□□ -0.54
TNC-211ENST00000537320 NUDT2P50583 147 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 PARP6Q2NL67 630 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 PTPN20Q4JDL3 420 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 SPANXN3Q5MJ09 141 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 ZNF470Q6ECI4 717 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 BBS12Q6ZW61 710 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 POLNQ7Z5Q5 900 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 PALB2Q86YC2 1186 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 PRKD2Q9BZL6 878 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 SLC40A1Q9NP59 571 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 WARS2Q9UGM6 360 aaKnown RBP11.65□□□□□ -0.54
TNC-211ENST00000537320 A0A0A0MRY4 1105 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 AKAP10O43572 662 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 MMP8P22894 467 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 PSMB4P28070 264 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 ATP5C1P36542 298 aaKnown RBP11.65□□□□□ -0.54
TNC-211ENST00000537320 HIRAP54198 1017 aaPredicted RBP11.65□□□□□ -0.54
TNC-211ENST00000537320 NOL9Q5SY16 702 aaKnown RBP11.65□□□□□ -0.54
TNC-211ENST00000537320 MYO1HQ8N1T3 1032 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 ALLCQ8N6M5 410 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 SPATA13Q96N96 652 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 TBL1YQ9BQ87 522 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 FTHL17Q9BXU8 183 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 GID8Q9NWU2 228 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 CHCHD3Q9NX63 227 aaKnown RBP11.65□□□□□ -0.54
TNC-211ENST00000537320 UTP6Q9NYH9 597 aaKnown RBP11.65□□□□□ -0.54
TNC-211ENST00000537320 NCKIPSDQ9NZQ3 722 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 WRAP73Q9P2S5 460 aaPredicted RBP11.65□□□□□ -0.54
TNC-211ENST00000537320 LOC102724159A0A0B4J2E5 919 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 GPR25O00155 361 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 FSCN2O14926 492 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 SERPINB5P36952 375 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 CORO7P57737 925 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 PWP2Q15269 919 aaKnown RBP11.65□□□□□ -0.54
TNC-211ENST00000537320 ZNF284Q2VY69 593 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 SPDYE7PQ495Y7 208 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 GRTP1Q5TC63 336 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 SEL1L3Q68CR1 1132 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 MTDHQ86UE4 582 aaKnown RBP11.65□□□□□ -0.54
TNC-211ENST00000537320 HSD3B7Q9H2F3 369 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 PDZD7Q9H5P4 517 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 RBPJLQ9UBG7 517 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 CTNNAL1Q9UBT7 734 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 TMEM191CA6NGB0 347 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 SYCE1LA8MT33 242 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 MAP2K7O14733 419 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 SMPD1P17405 629 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 DDX39BQ13838 428 aaKnown RBP11.65□□□□□ -0.54
TNC-211ENST00000537320 C16orf59Q7L2K0 433 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 SUGP1Q8IWZ8 645 aaKnown RBP11.65□□□□□ -0.54
TNC-211ENST00000537320 TOP6BLQ8N6T0 577 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 LENG1Q96BZ8 264 aaPredicted RBP11.65□□□□□ -0.54
TNC-211ENST00000537320 SRPK1Q96SB4 655 aaKnown RBP11.65□□□□□ -0.54
TNC-211ENST00000537320 TMEM120AQ9BXJ8 343 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 CCDC90BQ9GZT6 254 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 ZCWPW1Q9H0M4 648 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 UXTQ9UBK9 157 aaPredicted RBP11.65□□□□□ -0.54
TNC-211ENST00000537320 PLA2G4CQ9UP65 541 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 DERAQ9Y315 318 aa11.65□□□□□ -0.54
TNC-211ENST00000537320 ERI2A8K979 691 aaKnown RBP11.64□□□□□ -0.55
TNC-211ENST00000537320 GOT1P17174 413 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 MZF1P28698 734 aaPredicted RBP11.64□□□□□ -0.55
TNC-211ENST00000537320 MMP13P45452 471 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 BTKQ06187 659 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 GRIK3Q13003 919 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 ITGA7Q13683 1181 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 ITGA9Q13797 1035 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 CNGA3Q16281 694 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 SDHAF4Q5VUM1 108 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 DCLRE1AQ6PJP8 1040 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 RRM2BQ7LG56 351 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 FAM9CQ8IZT9 166 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 C1orf127Q8N9H9 656 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 VPS37AQ8NEZ2 397 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 OR9Q1Q8NGQ5 310 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 LRRN4Q8WUT4 740 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 USP6NLQ92738 828 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 ZNF333Q96JL9 665 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 BCAS3Q9H6U6 928 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 ZNF446Q9NWS9 450 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 STX18Q9P2W9 335 aaKnown RBP11.64□□□□□ -0.55
TNC-211ENST00000537320 ARHGAP26Q9UNA1 814 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 ADAMTSL3P82987 1691 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 A0A096LPK6 155 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 FKTNO75072 461 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 ERBB2P04626 1255 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 CDH2P19022 906 aaPredicted RBP11.64□□□□□ -0.55
TNC-211ENST00000537320 CYP2C18P33260 490 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 KBTBD12Q3ZCT8 623 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 RAP1GAP2Q684P5 730 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 FAM35AQ86V20 835 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 LRRC39Q96DD0 335 aa11.64□□□□□ -0.55
TNC-211ENST00000537320 APOPT1Q96IL0 206 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms