RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 UCMAQ8WVF2 138 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 SLC9A6Q92581 669 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 TBC1D5Q92609 795 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 HTATIP2Q9BUP3 242 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 STN1Q9H668 368 aaKnown RBP5.98□□□□□ -1.45
PRKDC-208ENST00000536710 TERF2IPQ9NYB0 399 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 SLC25A13Q9UJS0 675 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 B3GNT3Q9Y2A9 372 aa5.98□□□□□ -1.45
PRKDC-208ENST00000536710 HEMK1Q9Y5R4 338 aaPredicted RBP5.98□□□□□ -1.45
PRKDC-208ENST00000536710 CYP3A7-CYP3A51PA0A087WV96 503 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 GRID2IPA4D2P6 1211 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 TBX18O95935 607 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 MT-CO3P00414 261 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 HNRNPCP07910 306 aaKnown RBP eCLIP5.97□□□□□ -1.45
PRKDC-208ENST00000536710 CYP3A7P24462 503 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 PRKCHP24723 683 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 NDUFS1P28331 727 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 PSMC2P35998 433 aaKnown RBP5.97□□□□□ -1.45
PRKDC-208ENST00000536710 CASP2P42575 452 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 SLC37A1P57057 533 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 GAB1Q13480 694 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 THOC5Q13769 683 aaKnown RBP5.97□□□□□ -1.45
PRKDC-208ENST00000536710 GPR162Q16538 588 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 LIPMQ5VYY2 423 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 DENND1BQ6P3S1 775 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 TMEM88Q6PEY1 159 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 SLC39A5Q6ZMH5 540 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 GRASPQ7Z6J2 395 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-208ENST00000536710 KRTAP19-1Q8IUB9 90 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 TSPYL6Q8N831 410 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 ADPRHL1Q8NDY3 354 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 RNF125Q96EQ8 232 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 PDLIM2Q96JY6 352 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 CCDC17Q96LX7 622 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 GPR78Q96P69 363 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 ZNF747Q9BV97 191 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 ASNSD1Q9NWL6 643 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 FOXJ2Q9P0K8 574 aa5.97□□□□□ -1.45
PRKDC-208ENST00000536710 CNOT7Q9UIV1 285 aaKnown RBP5.97□□□□□ -1.45
PRKDC-208ENST00000536710 FBXO9Q9UK97 447 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-208ENST00000536710 LMTK3Q96Q04 1460 aa5.96□□□□□ -1.45
PRKDC-208ENST00000536710 B4E171 279 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 LYL1P12980 280 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 TSPAN7P41732 249 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 STAT6P42226 847 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 PAFAH1B1P43034 410 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 CASP6P55212 293 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 RPP30P78346 268 aaKnown RBP5.96□□□□□ -1.46
PRKDC-208ENST00000536710 SIM1P81133 766 aaPredicted RBP5.96□□□□□ -1.46
PRKDC-208ENST00000536710 ALKBH1Q13686 389 aaKnown RBP5.96□□□□□ -1.46
PRKDC-208ENST00000536710 HYIQ5T013 277 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 CC2D1BQ5T0F9 858 aaKnown RBP5.96□□□□□ -1.46
PRKDC-208ENST00000536710 AKNAD1Q5T1N1 836 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 CEP85Q6P2H3 762 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 CLEC4GQ6UXB4 293 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 TRIM72Q6ZMU5 477 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 LAS2Q8IYD9 372 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 VPS52Q8N1B4 723 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 NEU4Q8WWR8 484 aaPredicted RBP5.96□□□□□ -1.46
PRKDC-208ENST00000536710 RNF26Q9BY78 433 aaPredicted RBP5.96□□□□□ -1.46
PRKDC-208ENST00000536710 TRIM31Q9BZY9 425 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 TRIM2Q9C040 744 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 OSBPL5Q9H0X9 879 aaPredicted RBP5.96□□□□□ -1.46
PRKDC-208ENST00000536710 SYNPO2LQ9H987 977 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 TLR8Q9NR97 1041 aaKnown RBP5.96□□□□□ -1.46
PRKDC-208ENST00000536710 IL17RBQ9NRM6 502 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 THAP1Q9NVV9 213 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 ALKBH4Q9NXW9 302 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 MTMR4Q9NYA4 1195 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 SH3BP4Q9P0V3 963 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 ENTPD2Q9Y5L3 495 aa5.96□□□□□ -1.46
PRKDC-208ENST00000536710 COL4A3Q01955 1670 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 TMEM191CA6NGB0 347 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 PRYO14603 147 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 GUCY1B2O75343 617 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 ADRB1P08588 477 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 ALDOCP09972 364 aaKnown RBP5.95□□□□□ -1.46
PRKDC-208ENST00000536710 GGT5P36269 586 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 SHC2P98077 582 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 HOXA4Q00056 320 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-208ENST00000536710 ABHD18Q0P651 414 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 TBL3Q12788 808 aaKnown RBP5.95□□□□□ -1.46
PRKDC-208ENST00000536710 TMEM63BQ5T3F8 832 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 CCDC30Q5VVM6 783 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 ACAD10Q6JQN1 1059 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 SLC22A25Q6T423 547 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 VSTM1Q6UX27 236 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 DSTYKQ6XUX3 929 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 C1orf122Q6ZSJ8 110 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 C16orf71Q8IYS4 520 aaPredicted RBP5.95□□□□□ -1.46
PRKDC-208ENST00000536710 LINC01465Q8N7H1 131 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 LARP4BQ92615 738 aaKnown RBP5.95□□□□□ -1.46
PRKDC-208ENST00000536710 APOPT1Q96IL0 206 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 ABHD14AQ9BUJ0 271 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 AGXT2Q9BYV1 514 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 CTDSP1Q9GZU7 261 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 MROH8Q9H579 483 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 SFXN1Q9H9B4 322 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 CPNE5Q9HCH3 593 aa5.95□□□□□ -1.46
PRKDC-208ENST00000536710 OLA1Q9NTK5 396 aaKnown RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms