RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 FAM133BQ5BKY9 247 aaKnown RBP11.22□□□□□ -0.61
CCDC60-202ENST00000535685 PPM1JQ5JR12 505 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 LYSMD4Q5XG99 296 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 DESI1Q6ICB0 168 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 TCEAL6Q6IPX3 200 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 DPY19L2P1Q6NXN4 242 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 DENND1BQ6P3S1 775 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 ADIPOR2Q86V24 386 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 SCUBE3Q8IX30 993 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 TMEFF1Q8IYR6 380 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 AHI1Q8N157 1196 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 DOCK4Q8N1I0 1966 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 FRMD1Q8N878 549 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 EPS8L1Q8TE68 723 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 DQX1Q8TE96 717 aaKnown RBP11.22□□□□□ -0.61
CCDC60-202ENST00000535685 CLEC4CQ8WTT0 213 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 PIGKQ92643 395 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 WNT2BQ93097 391 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 TCEAL3Q969E4 200 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 LMLNQ96KR4 655 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 FCRL2Q96LA5 508 aaPredicted RBP11.22□□□□□ -0.61
CCDC60-202ENST00000535685 CRACR2AQ9BSW2 395 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 LHX5Q9H2C1 402 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 TMEM245Q9H330 911 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 SMOC1Q9H4F8 434 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 FBRSQ9HAH7 460 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 SIX2Q9NPC8 291 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 ITM2CQ9NQX7 267 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 ASNSD1Q9NWL6 643 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 CYTH4Q9UIA0 394 aa11.22□□□□□ -0.61
CCDC60-202ENST00000535685 TSR3Q9UJK0 312 aaKnown RBP11.22□□□□□ -0.61
CCDC60-202ENST00000535685 PAPSS1O43252 624 aaPredicted RBP11.21□□□□□ -0.61
CCDC60-202ENST00000535685 THAP12O43422 761 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 CALCAP01258 141 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 PABPC1P11940 636 aaKnown RBP11.21□□□□□ -0.61
CCDC60-202ENST00000535685 OXTRP30559 389 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 IRX4P78413 519 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 RPL6Q02878 288 aaKnown RBP11.21□□□□□ -0.61
CCDC60-202ENST00000535685 ZNF33AQ06730 810 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 CAMK2GQ13555 558 aaPredicted RBP11.21□□□□□ -0.61
CCDC60-202ENST00000535685 DUOXA1Q1HG43 343 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 DAB2IPQ5VWQ8 1189 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 BLOC1S3Q6QNY0 202 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 FIBINQ8TAL6 211 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 FOXJ1Q92949 421 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 TTC17Q96AE7 1141 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 NUSAP1Q9BXS6 441 aaKnown RBP11.21□□□□□ -0.61
CCDC60-202ENST00000535685 MIS12Q9H081 205 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 PCED1AQ9H1Q7 454 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 PRDM16Q9HAZ2 1276 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 POPDC2Q9HBU9 364 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 CAPN10Q9HC96 672 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 TMEM9BQ9NQ34 198 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 TMEM74BQ9NUR3 256 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 WSB2Q9NYS7 404 aaPredicted RBP11.21□□□□□ -0.61
CCDC60-202ENST00000535685 DACH1Q9UI36 760 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 RAD54BQ9Y620 910 aa11.21□□□□□ -0.61
CCDC60-202ENST00000535685 KNTC1P50748 2209 aa11.21□□□□□ -0.62
CCDC60-202ENST00000535685 C4orf47A7E2U8 309 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 UPK3BL1B0FP48 263 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 PATE3B3GLJ2 98 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 UPK3BL2E5RIL1 263 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 E5RJQ4 531 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 PIK3R2O00459 728 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 SYNCRIPO60506 623 aaKnown RBP11.2□□□□□ -0.62
CCDC60-202ENST00000535685 SERPINF2P08697 491 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 DLDP09622 509 aaKnown RBP11.2□□□□□ -0.62
CCDC60-202ENST00000535685 CSRP1P21291 193 aaKnown RBP11.2□□□□□ -0.62
CCDC60-202ENST00000535685 ITPKAP23677 461 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 PRKCHP24723 683 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 CD6P30203 668 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 SLC6A4P31645 630 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 MTIF2P46199 727 aaKnown RBP11.2□□□□□ -0.62
CCDC60-202ENST00000535685 COPAP53621 1224 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 YWHAZP63104 245 aaKnown RBP11.2□□□□□ -0.62
CCDC60-202ENST00000535685 PTK2Q05397 1052 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 MTA1Q13330 715 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 PDCLQ13371 301 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 ARID5BQ14865 1188 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 NR6A1Q15406 480 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 TRIM61Q5EBN2 209 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 MIIPQ5JXC2 388 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 SYPL2Q5VXT5 272 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 NADSYN1Q6IA69 706 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 GJB7Q6PEY0 223 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 CHST9Q7L1S5 443 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 TMPRSS6Q8IU80 811 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 SLC41A1Q8IVJ1 513 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 FAM71AQ8IYT1 594 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 WDTC1Q8N5D0 677 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 KDM1BQ8NB78 822 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 HJURPQ8NCD3 748 aaPredicted RBP11.2□□□□□ -0.62
CCDC60-202ENST00000535685 CADM4Q8NFZ8 388 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 OR2T3Q8NH03 318 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 DNASE2BQ8WZ79 361 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 FAM149B1Q96BN6 582 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 SLC2A13Q96QE2 648 aa11.2□□□□□ -0.62
CCDC60-202ENST00000535685 USB1Q9BQ65 265 aaKnown RBP11.2□□□□□ -0.62
CCDC60-202ENST00000535685 MKRN2Q9H000 416 aaKnown RBP11.2□□□□□ -0.62
CCDC60-202ENST00000535685 NUP62CLQ9H1M0 184 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms