RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 GOT1P17174 413 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 TGM2P21980 687 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 UBA1P22314 1058 aaKnown RBP16.31■□□□□ 0.2
MCF2L-232ENST00000535094 MPSTP25325 297 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 KLF10Q13118 480 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 SEPT6Q14141 434 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 PRPSAP1Q14558 356 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 CES4AQ5XG92 561 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 AMIGO2Q86SJ2 522 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 PDSS2Q86YH6 399 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 PQLC1Q8N2U9 271 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.31■□□□□ 0.2
MCF2L-232ENST00000535094 C1orf127Q8N9H9 656 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 JADE3Q92613 823 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 DTNBP1Q96EV8 351 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 LIN28AQ9H9Z2 209 aaKnown RBP16.31■□□□□ 0.2
MCF2L-232ENST00000535094 SIRPGQ9P1W8 387 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 ARHGAP10A1A4S6 786 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 CAPN14A8MX76 684 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 RNF103O00237 685 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 VTNP04004 478 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 SLC9B1Q4ZJI4 515 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 LRRC8EQ6NSJ5 796 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 RTKN2Q8IZC4 609 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 FBXW8Q8N3Y1 598 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 HTR3CQ8WXA8 447 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 OMDQ99983 421 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 MED10Q9BTT4 135 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 DHRS4Q9BTZ2 278 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 IARS2Q9NSE4 1012 aaKnown RBP16.31■□□□□ 0.2
MCF2L-232ENST00000535094 SYBUQ9NX95 663 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 EFR3BQ9Y2G0 817 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 SPATA31D3P0C874 917 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 VDRP11473 427 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 CRABP2P29373 138 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 GABRB2P47870 512 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 MAPK10P53779 464 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 BACE1P56817 501 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 CXCL9Q07325 125 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 CYLC2Q14093 348 aaPredicted RBP16.31■□□□□ 0.2
MCF2L-232ENST00000535094 CCNIQ14094 377 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 STILQ15468 1287 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 POTEAQ6S8J7 498 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 SPATA31D4Q6ZUB0 917 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 RYBPQ8N488 228 aaPredicted RBP16.31■□□□□ 0.2
MCF2L-232ENST00000535094 ZFAND2BQ8WV99 257 aa16.31■□□□□ 0.2
MCF2L-232ENST00000535094 KLRG2A4D1S0 409 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-232ENST00000535094 ITGAXP20702 1163 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 GRK2P25098 689 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 PDK2Q15119 407 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 IER5Q5VY09 327 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 CLEC4CQ8WTT0 213 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 OR52B2Q96RD2 323 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 GCOM2Q9BZD3 368 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-232ENST00000535094 USP29Q9HBJ7 922 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 GPAMQ9HCL2 828 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 NHSQ6T4R5 1651 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 CASQ2O14958 399 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-232ENST00000535094 CHRNGP07510 517 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 SPRP35270 261 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-232ENST00000535094 CASP2P42575 452 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 PMF1Q6P1K2 205 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 ZPBP2Q6X784 338 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 IFNEQ86WN2 208 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 PCDHA11Q9Y5I1 949 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 A0A087WZ62 844 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 PIGNO95427 931 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 THRAP10827 490 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 ARL2P36404 184 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 SH3BGRP55822 239 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-232ENST00000535094 MXD4Q14582 209 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-232ENST00000535094 ARCQ7LC44 396 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 NIPA2Q8N8Q9 360 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 COPS5Q92905 334 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 NPAS2Q99743 824 aa16.3■□□□□ 0.2
MCF2L-232ENST00000535094 FDXACB1Q9BRP7 624 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-232ENST00000535094 FRMD8Q9BZ67 464 aaPredicted RBP16.3■□□□□ 0.2
MCF2L-232ENST00000535094 RPL5P46777 297 aaKnown RBP16.29■□□□□ 0.2
MCF2L-232ENST00000535094 PPIDQ08752 370 aaKnown RBP16.29■□□□□ 0.2
MCF2L-232ENST00000535094 GK3PQ14409 553 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 NADK2Q4G0N4 442 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 PPP1R26Q5T8A7 1209 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-232ENST00000535094 DCAF15Q66K64 600 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 SEL1L3Q68CR1 1132 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 AAGABQ6PD74 315 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 CDT1Q9H211 546 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 SNX15Q9NRS6 342 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 ATXN10Q9UBB4 475 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 COPG2Q9UBF2 871 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 SYNPO2Q9UMS6 1093 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 GNEQ9Y223 722 aaKnown RBP16.29■□□□□ 0.2
MCF2L-232ENST00000535094 V9GYQ6 96 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 PSMC3P17980 439 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 XRCC1P18887 633 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-232ENST00000535094 SULT1E1P49888 294 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 ZNF132P52740 706 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 PLK1P53350 603 aa16.29■□□□□ 0.2
MCF2L-232ENST00000535094 HSF5Q4G112 596 aaPredicted RBP16.29■□□□□ 0.2
MCF2L-232ENST00000535094 DGCR14Q96DF8 476 aaKnown RBP16.29■□□□□ 0.2
MCF2L-232ENST00000535094 AGAP2Q99490 1192 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms